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PLM3_127_b2_sep16_scaffold_980_12

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(11279..13123)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 614.0
  • Bit_score: 968
  • Evalue 3.30e-279
1-deoxy-D-xylulose-5-phosphate synthase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKS8_NITSI similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 614.0
  • Bit_score: 968
  • Evalue 2.40e-279
1-deoxy-D-xylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 614.0
  • Bit_score: 968
  • Evalue 6.70e-280

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Taxonomy

Nitrosomonas sp. Is79A3 → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGTACGAACTCCTCGAGAAGATCAGCTATCCGTCCGACCTGCGCGCACTCGAACGCAAGCAACTCACGGAGCTCGCCAGGGAATTGCGTGATTATGTGATTCATTCGGTGGCAAACACCGGTGGTCACCTGTCATCCAATCTCGGCACTGTTGAACTCACGGTGGCGCTGCACTATGTTTTCAACACGCCCCATGATCGTCTGGTTTGGGATGTCGGCCATCAGACCTACGCCCAGAAGATTCTCACCGGGCGGCGGGAGCGGATGTCGACGCTGCGACAGTATGGCGGCCTAGCCGGCTTTCCGCGCCGTATCGAAAGTGAATACGACACCTTCGGCACCGCACATTCCAGCACCTCGATCAGCGCCGCCCTCGGCATGGCGGTGGCGGCGCGCATGAAGGGCGAGGACAGGCGGGTGGTGGCGATCATCGGTGACGGTGCGATGACCGCCGGCATGGCATTCGAGGCGCTGAACAACGCGGGAGCGATGGACGCAAACCTTCTGGTCGTTCTGAACGACAACGACATGTCGATCTCTGAAAACGTCGGTGCGCTTAACAACTACCTGGCGAAATTGATGTCCGGACGCTTCTACGCGGCTGCGTGGAAAACCAGCGAGAAAGTGCTCGGTGTGGTGCCGTCGATGCTGGAGCTGGCCAAGCGCGCCGAAGAACACGTGAAGGGCATGGTCACGCCCGGCACCTTGTTCGAGGAGTTCGGCTTCAACTACATCGGCCCGATAGACGGCCACAACCTCGACGTGCTGGTGTCGACCCTCGGCAATCTGAAAAAACTCGACGGACCGCAGTTCCTGCACATCGTCACCCGCAAAGGCAAAGGGTACGAGCCGGCGGAAAAGGACCCGATCCTGTACCACGGGGTAACCAAATTCGACCCGGACGCGGGCATCACACCCAAGTCCGGCGGAAAGCCGACCTACACCCACATATTTGGCGATTGGCTCTGCGACATGGCGGCGCTGGATTCGCGCCTGATCGGAATCACACCGGCGATGCGCGAGGGGTCAGGGTTGGTGCGTTTCTCCCAGGAGTACGCGGACCGGTATTTCGACGTCGGTATCGCCGAGCAGCACGCGCTCACTTTCGCCGCCGGATTGGCGTGCGAGGGTCTGAAGCCGGTGGTGGCAATCTATTCGACCTTCTTGCAACGCGCCTACGATCAATTGATCCACGACATCTGCATCCAGAACCTGCCGGTCTTGTTCGGAATCGATCGCGCCGGGCTGGTCGGCGCCGATGGGCCAACGCACGCCGGCAGCTTCGACCTAAGCTACCTGCGCTGCCTGCCCAACATCGTGGTGATGGCCCCGAGCGACGAGAACGAATGCCGCCAGATGCTCTATACCGGCTTTCAGATCGACGGCCCGGCGGCGGTGCGCTACCCGCGCGGAAGCGGGCCGGGCGTGCCGGTCCAAAAGGACCTGACCGCGCTGCGGATCGGCAAGGGTGAGGTGCGCCGCCACGGCCGGCGGGTTGCGATCCTGTGTTTCGGTGCGCTCCTCAAGCCTTGCCTGGAAGCCGCGGAGAAGCTCGACGCTACGGTTGCCAACATGCGTTTCGTGAAACCACTGGACGAAGAGCTGGTCCGCGAACTGGCGACCGCGCACGAGTGGCTGGTCACCGTGGAAGAGAACACCGTCCTTGGTGGTGCCGGTAGCGCCGTCCTGGAAGTCCTTGAAAAACAAGGAATTCATAAGAAGGTTCTGCAGCTTGGGTTGCCGGATCGTTTTGTCGATCACGGCGATCCGGCGCGATTGCTCAAGGAATGCGGTCTGGATGCGGAGGGCATCCAGACGTCGATTGCGGCAAAATTAGCCGAGTAG
PROTEIN sequence
Length: 615
MYELLEKISYPSDLRALERKQLTELARELRDYVIHSVANTGGHLSSNLGTVELTVALHYVFNTPHDRLVWDVGHQTYAQKILTGRRERMSTLRQYGGLAGFPRRIESEYDTFGTAHSSTSISAALGMAVAARMKGEDRRVVAIIGDGAMTAGMAFEALNNAGAMDANLLVVLNDNDMSISENVGALNNYLAKLMSGRFYAAAWKTSEKVLGVVPSMLELAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHNLDVLVSTLGNLKKLDGPQFLHIVTRKGKGYEPAEKDPILYHGVTKFDPDAGITPKSGGKPTYTHIFGDWLCDMAALDSRLIGITPAMREGSGLVRFSQEYADRYFDVGIAEQHALTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDICIQNLPVLFGIDRAGLVGADGPTHAGSFDLSYLRCLPNIVVMAPSDENECRQMLYTGFQIDGPAAVRYPRGSGPGVPVQKDLTALRIGKGEVRRHGRRVAILCFGALLKPCLEAAEKLDATVANMRFVKPLDEELVRELATAHEWLVTVEENTVLGGAGSAVLEVLEKQGIHKKVLQLGLPDRFVDHGDPARLLKECGLDAEGIQTSIAAKLAE*