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PLM3_127_b2_sep16_scaffold_1268_11

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 8123..9046

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BVK1_9NEIS similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 400
  • Evalue 9.90e-109
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 400
  • Evalue 1.40e-108
rpoS; RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 399
  • Evalue 4.80e-109

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Taxonomy

Pseudogulbenkiania ferrooxidans → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAACGAGGAGAATTATTCTTCACAGGAAGACGGCGTCGAAGAACCCGCGCCCGTCGAAGAGCCCGCTGTCGATGACTATTTCGGCACCGACATCCTCAGCGACGTCACCCAGCTCTATTTCAACGACATCGGGCAGAATGCGCTGCTCACGGTAGAGGAAGAGGTCAGGTACGTGCGACTGGTCAAGCAGGGGGATTTCCTGTCACGCCAGAAGATGATCGAACACAATCTGCGGCTGGTGGTGAACATCGCCAAGCACTATACCGGCCGCGGGCTGCAGTTGCTGGACCTGATCGAAGAAGGCAACCTCGGCCTGATCCACGCACTTGAGAAATTCGATCCCGAACGCGGCTTCCGCTTTTCCACCTATGCCACGTGGTGGATCCGCCAGAGCATCGAACGCGCCATCATGTATCAGTCGCGCACCATCCGCCTGCCCGTGCATGTGATCAAGGAACTGAACACGGTGCTGCGGGCGATGCGCCATCTCGAGACCCATTCCGAGTGCGACCCCAGCCCGGATGACGTTGCGCATCTGGTGGACTTCCGGGTCGAAGACGTGCGTCGCCTGCTGTCACTCAACGAGCGCATGACGTCGCTGGATGCGCCCCTTGAGATTGATCCCATGCTTTCGGTTGGCGAATCGATCGCCGACGAATCCACCCCGCAGCCGGATATCAGGCTGGAGAACGCAGAAATCGAGACTTACGTGCGCGAGTGGCTGAAGCAGTTGAACGAACGCCAGCGCAGCGTGATCGAGCGGCGCTACGGGCTCAACGGCTCGGACATCCACACCCTCGAACAGCTGGCGCAGAACCTGAAGCTGACCCGGGAAAGAGTGCGCCAGATCCAGATCGAGGCGCTCGCCTCGCTGCGCAAGATTCTGCGCCGCAGCGGACTGTCGAGGGAAACGTTACTCTAG
PROTEIN sequence
Length: 308
MNEENYSSQEDGVEEPAPVEEPAVDDYFGTDILSDVTQLYFNDIGQNALLTVEEEVRYVRLVKQGDFLSRQKMIEHNLRLVVNIAKHYTGRGLQLLDLIEEGNLGLIHALEKFDPERGFRFSTYATWWIRQSIERAIMYQSRTIRLPVHVIKELNTVLRAMRHLETHSECDPSPDDVAHLVDFRVEDVRRLLSLNERMTSLDAPLEIDPMLSVGESIADESTPQPDIRLENAEIETYVREWLKQLNERQRSVIERRYGLNGSDIHTLEQLAQNLKLTRERVRQIQIEALASLRKILRRSGLSRETLL*