ggKbase home page

PLM3_127_b2_sep16_scaffold_2968_7

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 8279..8893

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane protein Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IV05_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 207.0
  • Bit_score: 308
  • Evalue 2.60e-81
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 207.0
  • Bit_score: 308
  • Evalue 7.40e-82
Transmembrane protein {ECO:0000313|EMBL:ADJ61724.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 207.0
  • Bit_score: 308
  • Evalue 3.70e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGAAAAAATACCTCATCACGGGGCTCCTGATCTGGGTCCCGCTGGTCATTACCGTGTGGGTGCTGAGTTTTCTGGTCGGCACCCTCGACCAAACGCTGCTGCTGCTTCCGGAGTCCTGGCAGCCGCGTTCGTGGCTCGGCTTTCACATTCCCGGCCTGGGCGTGCTGATGACGCTGGCAGTCGTGTTCGCCACCGGGGTGTTCGCCGCCAACATCATCGGCCAGCGTCTGGTGATGTACTGGGAAGGTCTGCTCGCCCGCATCCCAATCGTCAAGTCGCTTTACTCCAGCGTCAAGCAGGTTTCGGACACGCTGTTTTCCTCGTCCGCGCTGGCATTTCGCAAGGCGCTGCTGGTGCAGTATCCGCGCCAGGGTTCATGGACCATCGCTTTTCTCACCGGGCAGCCGGGCGGCGATGTAGCAAACCATCTGAAAGGCGAATACGTGAGCGTGTACGTGCCTACCACACCCAACCCGACTTCCGGGTTCTTCCTGATGATGCCTACCGCGGATGTCGTGGAACTCGACATCAGCGTCGATGCCGCGCTCAAGTACATTATCTCGATGGGTGTGGCGCCGCCGGAAGACAAGAGCGCGACCAGCGACGCGGCGTGA
PROTEIN sequence
Length: 205
VKKYLITGLLIWVPLVITVWVLSFLVGTLDQTLLLLPESWQPRSWLGFHIPGLGVLMTLAVVFATGVFAANIIGQRLVMYWEGLLARIPIVKSLYSSVKQVSDTLFSSSALAFRKALLVQYPRQGSWTIAFLTGQPGGDVANHLKGEYVSVYVPTTPNPTSGFFLMMPTADVVELDISVDAALKYIISMGVAPPEDKSATSDAA*