ggKbase home page

PLM3_127_b2_sep16_scaffold_3934_11

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(9809..10054)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion membrane fusion protein, HlyD family Tax=Methylobacter tundripaludum SV96 RepID=G3IQG8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 4.60e-13
HlyD family type I secretion membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 87.0
  • Bit_score: 75
  • Evalue 5.40e-12
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 81.0
  • Bit_score: 118
  • Evalue 3.60e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGCTGGACGGCGTGGTGAAGCAGGTGAGCGCCGATGCTCACGAAAAACCCGAGTCGGGCAATCCGGCTAGCAAGGCCGTTCAGGAAGCGGCCTACCGTGCATTGATCAATCTGAGCAGCGACTATCTCCAGAGCCAGGGCAGGCAGCTGCGCCTCGTCCCCGGCATGCAGGTCAACGCCGAAATCCACCTCGGTACGAGGAGCGTCCTCGAATATCTCCTCTCGCCGGTCCAGAAGGTCGCCTGA
PROTEIN sequence
Length: 82
MLDGVVKQVSADAHEKPESGNPASKAVQEAAYRALINLSSDYLQSQGRQLRLVPGMQVNAEIHLGTRSVLEYLLSPVQKVA*