ggKbase home page

PLM3_127_b2_sep16_scaffold_3934_20

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 18445..19104

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, Fis family Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123R9_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 219.0
  • Bit_score: 387
  • Evalue 6.20e-105
Transposase {ECO:0000313|EMBL:KHF25183.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 219.0
  • Bit_score: 394
  • Evalue 5.40e-107
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 219.0
  • Bit_score: 387
  • Evalue 1.80e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solemya velum gill symbiont → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGTCGCACGAGACGATCTACCGCAGTCTCTTCATCCAGGCTCGAGGCGCCCTGAAGAAAGAGCTGTTCCAGCACCTAAGGCGCACGCGGGCGATGCGTCGCTCGCGTCATCACACGCAGAAGACCGATGATCACGGCAGGATCACCGACACCGTATCGATCCGTGAGCGCCCAGCATCGGTTGAAGACCGGGCCGTACCGGGTCACTGGGAGGGAGACCTGCTGTTCGGTAGCAACAAAAGTCAGATCGCAACCCTCGTCGAGCGCCGCACGCGCTACGTGATGCTGGCCAAGGCCGACGGCAAGGATACCGAGACGGTGATCAACGCTCTGATCAGGCACGCGCAAAAGTTACCGCGCGAGCTCTACCAGTCCCTCACCTGGGATCGCGGTAAAGAAATGGCCGATCACAAGCGCTTCACGTTGGCGACCGACATTAAAGTGTACTTCTGTGATCCGCAGAACCCCTGGCAGCGCGGTTCTAACGAGAACACCAACGGATTGCTGAGGCAGTACTTCCCGAAAGGCACGGATCTGTCGATCTACTCCCAAGCGGAACTGAATGCGGTGGCCCGGCGGTTAAATGAACGGCCGAGGAAAACACTAAACTATGAAACCCCAGCCGAACGATTTAGCCAATGTGTTGCGTCGATCGGTTGA
PROTEIN sequence
Length: 220
VSHETIYRSLFIQARGALKKELFQHLRRTRAMRRSRHHTQKTDDHGRITDTVSIRERPASVEDRAVPGHWEGDLLFGSNKSQIATLVERRTRYVMLAKADGKDTETVINALIRHAQKLPRELYQSLTWDRGKEMADHKRFTLATDIKVYFCDPQNPWQRGSNENTNGLLRQYFPKGTDLSIYSQAELNAVARRLNERPRKTLNYETPAERFSQCVASIG*