ggKbase home page

PLM3_127_b2_sep16_scaffold_1943_11

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(11429..12574)

Top 3 Functional Annotations

Value Algorithm Source
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 379.0
  • Bit_score: 483
  • Evalue 1.50e-133
Family 1 extracellular solute-binding protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 386.0
  • Bit_score: 438
  • Evalue 4.10e-120
potF; putrescine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 352.0
  • Bit_score: 429
  • Evalue 9.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter sp. BA-93 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGACGATTAAATTGCGACAGGGTCTGCTGGGGGTCGCTGTCACGCTGGCACTTGTTGCCTGCGGCCAGGGCGAGAAAGCCAAGGATGGGGAGCAGGCGGCTGATACACCCGCCGCGGCCGAAGAGAAGGTCGTCAACGTGTACAACTGGTCGGACTACATCGCCGAGGACACGCTCGCGAACTTCGAGAAGGAGACCGGGATCAAGGTCAACTACGACATGTACGACGGCAATGAGACGCTTGAGACCAAGCTGCTTGCCGGCAACTCCGGTTACGACATCGTGGTGCCGTCGGCGTCGTTTCTCGAACGGCAGATCAAGACGGGGGTGTACCAGAAGCTCGACAAATCGAAGCTGCCGAATCTCGCCCACATGGATCCTGAAGTGATGCAGCGCGCAGCGCTCCACGACCCGGGCAACGAGCATTCCGTCGTTTATATGTGGGGCACGACAGGCATTGGCTATAACCCGGACAAGGTCAACAAGGCATTCCCTAACGCGCCGGTGGACAGCTGGTCACTCGTGTACGAGCCGGAAAACGCGTCCAAGCTCAAGGGTTGTGGTATTGCGGTGCTCGATTCGTACTCGGAGATCACTTCGACCGTGCTCGCCTATCTCGGCAAGGATCCCAATAGCCAATCGGCCGACGATCTCGCGCTGGTCGAGGCGAAACTGCTCCAGATCCGGCCGTTCATCCGTTACATCCACTCTTCGCAGTACATCAACGATCTCGCCAATGGCGATATCTGCGTGGCGGTGGGCTACAGCGGCGACATCCTCCAGGCGCGCGATCGCGCGTCCGAAGCCGGCAACAACATCAATGTGAAGTACGCAGTGCCGAAGGAAGGCACGATCATCTGGTTCGACACCATGGCGATCCCGAAAGACGCGCCGCATCCCAACAATGCGCACGCTTTCATCAACTACATCATGGAGCCCGAAGTCGTTGCCCAGATCAGCAACTTCGTCAACTATGCCAACGGCAACGCCGATTCGCTGCCGTTCATCGACGAAGGCGTGCGCAACGATCCAGGCGTGTATCCGCCACCGGAAGTGAAAGCGAAGCTTTTCCCGGATTTGGCGGAGACACAGGAATACACGCGCTTGATGACGAGAACCTGGACCCGGTTCACGACCGGACAATAA
PROTEIN sequence
Length: 382
MTIKLRQGLLGVAVTLALVACGQGEKAKDGEQAADTPAAAEEKVVNVYNWSDYIAEDTLANFEKETGIKVNYDMYDGNETLETKLLAGNSGYDIVVPSASFLERQIKTGVYQKLDKSKLPNLAHMDPEVMQRAALHDPGNEHSVVYMWGTTGIGYNPDKVNKAFPNAPVDSWSLVYEPENASKLKGCGIAVLDSYSEITSTVLAYLGKDPNSQSADDLALVEAKLLQIRPFIRYIHSSQYINDLANGDICVAVGYSGDILQARDRASEAGNNINVKYAVPKEGTIIWFDTMAIPKDAPHPNNAHAFINYIMEPEVVAQISNFVNYANGNADSLPFIDEGVRNDPGVYPPPEVKAKLFPDLAETQEYTRLMTRTWTRFTTGQ*