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PLM3_127_b2_sep16_scaffold_2397_15

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(17006..18256)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 414.0
  • Bit_score: 451
  • Evalue 1.90e-124
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89683.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 414.0
  • Bit_score: 451
  • Evalue 9.30e-124
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 419.0
  • Bit_score: 431
  • Evalue 7.10e-118

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1251
ATGGAAACGGCGCGTGGCCACGTCGAGCGGCTGTTTCACGAGCAGGCCGGCGGCATCCAGGCAACGCTCATCCGCCTCCTGGGTGATCTTGACCTTGCGGGCGAAGTCATGCAGGAGGCTTTCGTCGCGGCGCTCAGCCTGTGGGACGAGCGCGGAGTTCCGGACAACCCGCGCAACTGGCTGATCACCACGGCGCGCAATCGCGCCATCGACCGACTGCGGCAGCGCCGCCGGTTCCTGGCACCCGAAGCATCAGCGAGCGTGCTCGCCGACCTCGACGATGCGGACGCGGAGATCGAGCGCCAACTCGGTGAACCGATCGCCGACGACCAGCTGCGACTGATCTTTACCTGCTGCCACTCGGCACTTTCGGTCGAGGCGCAGATCGCGCTGACCTTGCATACCTTGTGCGGCCTCACGAGCGAACAGATCGCGCGCGCATTTCTGATTCCCCTGCCGACGCTGGCGCAACGGCTGGTGCGGGCCAAGAAGAAGATCCGCGACGCCCGCGTTCCGTATCGAGTCCCGCCACCGGAGCTCTTACCCGAGCGGCTCGACAGCGCGCTGGCGGTGATCTATCTGGTATTCAACGAGGGGTATTTGAGCGCCGATGGCGAAGGTCCGATCCGCGCCGAACTGTGCAGCGAAGCGATTCGTCTGGCGCGCCTCGTGGCCTGCCTGCTGCCAACCGAGACCGAGCCGCGGGCGTTGCTCGCACTGATGCTCTTGCACGACGCCCGCAAGACGACGCGCGTCTCGAGATCGGGAGAACTGGTGCTGCTCGCGGACCAGGATCGCACGCGCTGGGATCGCAGGCAGATCGAGGAAGCGCTGGCGATCGTCGAGGAAGTACTCAAACGGGGAGGCGCACGGCCGTTTGCATTACAGGCTGCGATCGCCGCATTGCACGCACAAGCATCGCGCCCGCAGGACACCGATTGGCGACAGATCGCCGCGCTTTACAGCGTGCTGATTCGCCTGCACCCAAGCCCGGTGATCGAGTTGAATCGCGCCGCAGCCATCTCGATGGTGGACGGCCCCGAAGCCGCTCTACCGCTGATCGATTCGCTGGCGGCGCGCGGTGAGCTCGCGAACTATCACCTGTTGCACGCCACCCGCGCGGATTGCCTGAGGCGAGCGGGGCGTACGGATGCAGCGCGAGCGGCGTATCGGCAAGCGCTCGAGTGCGAAGTATCAGATGCGGAACGCCGGTTTCTCGAGCGACGCCTTGCGGAGCTCACCCTCTCCTAG
PROTEIN sequence
Length: 417
METARGHVERLFHEQAGGIQATLIRLLGDLDLAGEVMQEAFVAALSLWDERGVPDNPRNWLITTARNRAIDRLRQRRRFLAPEASASVLADLDDADAEIERQLGEPIADDQLRLIFTCCHSALSVEAQIALTLHTLCGLTSEQIARAFLIPLPTLAQRLVRAKKKIRDARVPYRVPPPELLPERLDSALAVIYLVFNEGYLSADGEGPIRAELCSEAIRLARLVACLLPTETEPRALLALMLLHDARKTTRVSRSGELVLLADQDRTRWDRRQIEEALAIVEEVLKRGGARPFALQAAIAALHAQASRPQDTDWRQIAALYSVLIRLHPSPVIELNRAAAISMVDGPEAALPLIDSLAARGELANYHLLHATRADCLRRAGRTDAARAAYRQALECEVSDAERRFLERRLAELTLS*