ggKbase home page

PLM3_127_b2_sep16_scaffold_4001_11

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(8002..10290)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding subunit ClpA Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH99_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 742.0
  • Bit_score: 1070
  • Evalue 0.0
clpA; Clp protease ClpX similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 746.0
  • Bit_score: 1076
  • Evalue 0.0
Clp protease ClpX {ECO:0000313|EMBL:AHK79262.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 744.0
  • Bit_score: 1076
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2289
GTGCTGAGCAACGAGCTTGAATACTGTCTCAACGACGCTTTCCAGAGCGCGCGCGAATCCCGTCACGAGTTCATGACGGTCGAGCACCTGCTGCTCGCGATTCTCGACACACCCAAGGTGCGCGAGATTCTGCGTGCGTGCGGCGCCGACACGCAGAAGCTGCGCACCGAATTGCAGTCATTCATCGAGCAGAGCACGCCCAGGCTGCCCGAGGACGACGAGCGCGAGGTGCAGCCGACCCTGGGGTTCCAGCGCGTCCTGCAACGCGCTGTGTTCCACGTGCAGTCGAGCGGTAAGAAGGAAGTCACTGTCGCCAACGTGCTGGTGGCCATCTTCAGCGAGAAGCAATCGCACGCGGCCTACCTCCTCAGCATGCAAGACGTGGCGCGACTCGACGTGGTTAATTACATCTCGCACGGCCTGAGCAAGATTCCCGATGAGCGCGGCGACAAGGATGAACAGGCAGCCGGCGTCGAAGGCGAGCGCGAGGTTGAGGGCGGTTCGAGCGCGCTCGAGAAATATGCAACCAACCTGAACAAGCTTGCCGCCGACGGCAAGATCGATCCGCTCATCGGCCGCCGTGCCGAGGTCCAGCGCACCATCGAGATCCTGTGCCGCCGCCGCAAGAACAACCCGCTGTACGTCGGCGAGGCGGGTGTGGGCAAGACGGCGATCGCGGAAGGACTGGCGCGAATGATCGTCGAGGGCCAGGTGCCCGACGTGCTGTCCGACTGCACCATCTACGCGCTCGACATGGGCGCACTGATCGCAGGTACCAAGTACCGGGGCGATTTCGAAAAGCGCCTCAAGGGCGTGATCACGGAGCTGAAGAAGAACCCCGGCGCGATCCTGTTCATCGACGAGATCCACACCGTCATTGGTGCGGGTGCGGCCTCGGGTGGCGTGATGGACGCTTCCAACCTGATCAAGCCAGTGCTCGCCAATGGCGAGCTGCGCTGCATCGGGTCGACGACCTACAACGAGTATCGCGGCATCTTCGAGAAGGACCACGCGCTCGCCCGCCGTTTCCAGAAGATCGAAGTGGTGGAGCCGAGCGTGGCGGAGACGGTGGATATCCTGGTCGGATTGAAGCCGCGGTTCGAAGAGCACCACGGGGTGCAGTACGCGGATGACGCGTTGCGTGCGGCGGCGGAGCTTTCCGCACGTCACATCAATGACCGGCATCTGCCCGATAAGGCCATCGATGTCGTCGACGAGGCCGGTGCGAGCCTGCGGCTCAAGCCCGCGGCCGAGCGTGAATCGACCGTCACCGTCGAGCAGGTCGAGAACGTGGTAGCGCGCATGGCGCGCATTCCGCCCAAGAACGTGTCGCTCTCGGACCGCGACGCCCTCAAGAACCTCGAGCGTAACCTCAAGCTGACGATCTTCGGTCAGGACAACGCCATCCAGGCACTGGCTGCGGCGATCAAGATGTCGCGTTCGGGGCTTGGCGATGAGCGCAAACCGGTGGGTTCGTTCTTGTTTGCCGGCCCGACCGGCGTCGGCAAGACCGAAGTGACCCGCCAGCTCGCGCTCGTCATGGGCGTGGAGTTCATCCGCTTCGACATGTCCGAGTACATGGAGCGGCACACGGTCTCGCGGCTCATCGGCGCGCCGCCGGGCTATGTCGGATTCGACCAGGGTGGATTACTGACCGAGGCGATCACCAAGCATCCGCATTCGGTGCTGTTGCTGGACGAGATCGAGAAGGCGCATCCGGACGTCTTCAACCTGCTGCTGCAGGTGATGGACCACGGCACGCTCACCGACAACAACGGCCGCAAGGCGGATTTTCGCCACGTCATCATCGTCATGACGACCAATGCGGGCGCCTTCGAGATGAACCGCGGCTCGATCGGCTTCACGCAGGCAGACAATTCGAGCGATGGCCTGGAGGCGATCCGGCGCATGTTCTCGCCGGAATTCCGCAACCGGCTCGATGCCATCATCCAGTTCAATGCGCTCGATCCGTCGACGATCGAGCGCGTGGTCGACAAGCTGCTGGTGGAAGTCGAGGCGCAACTCGAACAGAAGGGCGTTTCGCTGACCGTGGACGACGTGGCCCGCGCGTGGATTGCGCGCAAGGGCTACGACCCGAAGATGGGTGCGAGGCCGATGGCGCGCGTGATCCAGGAACACATCAAGCGGCCGCTGGCGGAGGACCTGCTGTTCGGCAAGCTGGTGGGCGGAGGTCACGTGCGCGTCACGGTGACCGAGGATGGCTCGGCGTTGCAGCTCTTCACGCGAGCCACCGACGAGCCGGAACTGATAGAAGAGAAAAGCGGTTAA
PROTEIN sequence
Length: 763
VLSNELEYCLNDAFQSARESRHEFMTVEHLLLAILDTPKVREILRACGADTQKLRTELQSFIEQSTPRLPEDDEREVQPTLGFQRVLQRAVFHVQSSGKKEVTVANVLVAIFSEKQSHAAYLLSMQDVARLDVVNYISHGLSKIPDERGDKDEQAAGVEGEREVEGGSSALEKYATNLNKLAADGKIDPLIGRRAEVQRTIEILCRRRKNNPLYVGEAGVGKTAIAEGLARMIVEGQVPDVLSDCTIYALDMGALIAGTKYRGDFEKRLKGVITELKKNPGAILFIDEIHTVIGAGAASGGVMDASNLIKPVLANGELRCIGSTTYNEYRGIFEKDHALARRFQKIEVVEPSVAETVDILVGLKPRFEEHHGVQYADDALRAAAELSARHINDRHLPDKAIDVVDEAGASLRLKPAAERESTVTVEQVENVVARMARIPPKNVSLSDRDALKNLERNLKLTIFGQDNAIQALAAAIKMSRSGLGDERKPVGSFLFAGPTGVGKTEVTRQLALVMGVEFIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKHPHSVLLLDEIEKAHPDVFNLLLQVMDHGTLTDNNGRKADFRHVIIVMTTNAGAFEMNRGSIGFTQADNSSDGLEAIRRMFSPEFRNRLDAIIQFNALDPSTIERVVDKLLVEVEAQLEQKGVSLTVDDVARAWIARKGYDPKMGARPMARVIQEHIKRPLAEDLLFGKLVGGGHVRVTVTEDGSALQLFTRATDEPELIEEKSG*