ggKbase home page

PLM3_127_b2_sep16_scaffold_6902_4

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(4185..4622)

Top 3 Functional Annotations

Value Algorithm Source
type 4 fimbrial biogenesis protein PilE Tax=Pseudomonas sp. S9 RepID=UPI00025569C5 similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 144.0
  • Bit_score: 108
  • Evalue 4.80e-21
general secretion pathway protein H similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 144.0
  • Bit_score: 105
  • Evalue 8.80e-21
General secretion pathway protein H {ECO:0000313|EMBL:AAZ59781.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 144.0
  • Bit_score: 105
  • Evalue 4.40e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus pinatubonensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGAAACACCGCGCACGAGGCGTGACGTTGATGGAGCTGATGGTGGTGGTCGCGGTGCTCTCCATCATCGCGTCGATCGCAGTTCCGTCATATCGGTCGTATCTGCGGCGCGCGCAGCGCAGCGATGCGACTGCAGAGCTGCTGCGCGTTCGAACCGCGCAGGAAAAGTTCTTCCTTCAGAACATTGCCTACACTGGTGATTTCGGGCCGGCCGGGCTGAACATGACACCCGCCGCGAGCGCGACACGGGCGTCGGAACACGGTTTCTACACGATTACTGTCGCAGTCAACGTGGCAGGGCGGCCCGTGCCGAACTTCGATGTCAGCGCCGCTGCCACTGGCGGTCAGCTTGATGACACCGCCTGTCAGACCTTCACGATCAACGAGGTGGGCGTCCGCGGGTCGAGCCCGAACGGCATCACGACCTGTTGGAAGTGA
PROTEIN sequence
Length: 146
MKHRARGVTLMELMVVVAVLSIIASIAVPSYRSYLRRAQRSDATAELLRVRTAQEKFFLQNIAYTGDFGPAGLNMTPAASATRASEHGFYTITVAVNVAGRPVPNFDVSAAATGGQLDDTACQTFTINEVGVRGSSPNGITTCWK*