Consensus taxonomy: RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_31682 | 5 | 3598 bp | 67.40 | 7.75 | 48.61 | |
PLM3_127_b2_sep16_scaffold_161355
Species:
RBG_16_RIF_WS3X_71_46_curated (66.67%)
|
3 | 3546 bp | 66.38 | 6.56 | 54.48 | |
PLM3_127_b2_sep16_scaffold_17469
Phylum:
Proteobacteria (66.67%)
|
3 | 4143 bp | 69.06 | 7.82 | 56.63 | |
PLM3_127_b2_sep16_scaffold_71077 | 5 | 3846 bp | 69.24 | 6.86 | 57.49 | |
PLM3_127_b2_sep16_scaffold_41609
Domain:
Bacteria (100%)
|
3 | 3370 bp | 68.55 | 7.48 | 57.69 | |
PLM3_127_b2_sep16_scaffold_58003
Species:
Nitrosomonas sp. Is79A3 (50%)
|
2 | 2693 bp | 65.06 | 6.96 | 58.49 | |
PLM3_127_b2_sep16_scaffold_52213
Phylum:
Gemmatimonadetes (50%)
|
4 | 3646 bp | 68.51 | 8.39 | 59.65 | |
PLM3_127_b2_sep16_scaffold_87810
Domain:
Bacteria (100%)
|
3 | 3115 bp | 68.15 | 5.15 | 60.10 | |
PLM3_127_b2_sep16_scaffold_27653
Species:
RBG_16_RIF_WS3X_71_46_curated (100%)
|
4 | 3899 bp | 71.97 | 6.23 | 62.17 | |
PLM3_127_b2_sep16_scaffold_17648
Species:
RBG_16_RIF_WS3X_71_46_curated (75%)
|
4 | 4122 bp | 67.71 | 7.13 | 63.46 | |
PLM3_127_b2_sep16_scaffold_38420
Species:
RBG_16_RIF_WS3X_71_46_curated (60%)
|
5 | 3759 bp | 69.25 | 7.66 | 65.44 | |
PLM3_127_b2_sep16_scaffold_13311
Domain:
Bacteria (60%)
|
5 | 6851 bp | 65.28 | 8.21 | 66.87 | |
PLM3_127_b2_sep16_scaffold_66373 | 3 | 2913 bp | 61.93 | 6.39 | 67.25 | |
PLM3_127_b2_sep16_scaffold_64895
Species:
RBG_16_RIF_WS3X_71_46_curated (50%)
|
4 | 2522 bp | 67.80 | 7.08 | 68.28 | |
PLM3_127_b2_sep16_scaffold_14035
Domain:
Bacteria (50%)
|
6 | 5653 bp | 68.69 | 9.50 | 68.41 | |
PLM3_127_b2_sep16_scaffold_66008
Domain:
Bacteria (100%)
|
4 | 4494 bp | 66.49 | 7.64 | 68.42 | |
PLM3_127_b2_sep16_scaffold_30342
Species:
RBG_16_RIF_WS3X_71_46_curated (87.5%)
|
8 | 6420 bp | 70.33 | 7.83 | 68.93 | |
PLM3_127_b2_sep16_scaffold_14536
Domain:
Bacteria (60%)
|
5 | 6721 bp | 68.53 | 7.79 | 69.59 | |
PLM3_127_b2_sep16_scaffold_10960
Domain:
Bacteria (85.71%)
|
7 | 6832 bp | 69.50 | 8.96 | 69.69 | |
PLM3_127_b2_sep16_scaffold_27242
Species:
RBG_16_RIF_WS3X_71_46_curated (80%)
|
5 | 5697 bp | 69.77 | 7.48 | 70.98 | |
PLM3_127_b2_sep16_scaffold_23753
Phylum:
Gemmatimonadetes (57.14%)
|
7 | 6045 bp | 69.66 | 6.75 | 71.27 | |
PLM3_127_b2_sep16_scaffold_38349
Species:
RBG_16_RIF_WS3X_71_46_curated (100%)
|
2 | 2631 bp | 68.19 | 5.70 | 72.18 | |
PLM3_127_b2_sep16_scaffold_39023
Species:
RBG_16_RIF_WS3X_71_46_curated (57.14%)
|
7 | 4141 bp | 68.15 | 6.85 | 72.74 | |
PLM3_127_b2_sep16_scaffold_9010
Species:
RBG_16_RIF_WS3X_71_46_curated (71.43%)
|
7 | 6435 bp | 67.51 | 7.93 | 72.96 | |
PLM3_127_b2_sep16_scaffold_124094 | 5 | 2592 bp | 68.67 | 7.41 | 73.26 | |
PLM3_127_b2_sep16_scaffold_38370
Domain:
Bacteria (100%)
|
4 | 4046 bp | 68.78 | 8.08 | 73.70 | |
PLM3_127_b2_sep16_scaffold_32665
Domain:
Bacteria (80%)
|
5 | 4609 bp | 68.74 | 10.48 | 73.75 | |
PLM3_127_b2_sep16_scaffold_160865
Domain:
Bacteria (50%)
|
6 | 2648 bp | 66.39 | 6.63 | 73.87 | |
PLM3_127_b2_sep16_scaffold_112665
Domain:
Bacteria (75%)
|
4 | 3646 bp | 64.23 | 6.38 | 74.22 | |
PLM3_127_b2_sep16_scaffold_16768
Species:
RBG_16_RIF_WS3X_71_46_curated (83.33%)
|
6 | 5401 bp | 68.49 | 6.86 | 74.26 | |
PLM3_127_b2_sep16_scaffold_49259
Species:
RBG_16_RIF_WS3X_71_46_curated (100%)
|
4 | 4145 bp | 71.07 | 7.31 | 74.48 | |
PLM3_127_b2_sep16_scaffold_126810
Domain:
Bacteria (100%)
|
3 | 2993 bp | 66.72 | 6.01 | 75.08 | |
PLM3_127_b2_sep16_scaffold_15263
Species:
RBG_16_RIF_WS3X_71_46_curated (50%)
|
4 | 4485 bp | 70.79 | 8.33 | 75.18 | |
PLM3_127_b2_sep16_scaffold_12472
Domain:
Bacteria (60%)
|
5 | 5033 bp | 66.60 | 8.26 | 75.58 | |
PLM3_127_b2_sep16_scaffold_20682
Class:
Betaproteobacteria (80%)
|
5 | 3760 bp | 63.78 | 9.14 | 75.64 | |
PLM3_127_b2_sep16_scaffold_39589 | 4 | 2582 bp | 68.63 | 8.60 | 75.64 | |
PLM3_127_b2_sep16_scaffold_25356
Species:
RBG_16_RIF_WS3X_71_46_curated (80%)
|
5 | 6120 bp | 70.41 | 7.77 | 75.69 | |
PLM3_127_b2_sep16_scaffold_67508
Species:
RBG_16_RIF_WS3X_71_46_curated (50%)
|
4 | 4075 bp | 72.05 | 6.22 | 75.98 | |
PLM3_127_b2_sep16_scaffold_41695
Domain:
Bacteria (53.85%)
|
13 | 7663 bp | 66.25 | 5.93 | 76.50 | |
PLM3_127_b2_sep16_scaffold_69945
Species:
RBG_16_RIF_WS3X_71_46_curated (83.33%)
|
6 | 3592 bp | 69.38 | 8.02 | 77.09 | |
PLM3_127_b2_sep16_scaffold_39811
Domain:
Bacteria (83.33%)
|
6 | 10365 bp | 69.90 | 10.74 | 77.11 | |
PLM3_127_b2_sep16_scaffold_22189
Domain:
Bacteria (70%)
|
10 | 9012 bp | 68.58 | 8.11 | 77.16 | |
PLM3_127_b2_sep16_scaffold_46790
Phylum:
Chloroflexi (50%)
|
4 | 3230 bp | 69.72 | 10.26 | 77.46 | |
PLM3_127_b2_sep16_scaffold_8675
Species:
RBG_16_RIF_WS3X_71_46_curated (62.5%)
|
8 | 8455 bp | 67.68 | 9.35 | 77.53 | |
PLM3_127_b2_sep16_scaffold_33831
Species:
RBG_16_RIF_WS3X_71_46_curated (50%)
|
6 | 7091 bp | 69.54 | 8.80 | 77.85 | |
PLM3_127_b2_sep16_scaffold_17943
Species:
RBG_16_RIF_WS3X_71_46_curated (57.14%)
|
14 | 14681 bp | 70.27 | 7.50 | 78.26 | |
PLM3_127_b2_sep16_scaffold_32210
Species:
RBG_16_RIF_WS3X_71_46_curated (100%)
|
3 | 3779 bp | 70.42 | 7.90 | 78.27 | |
PLM3_127_b2_sep16_scaffold_11495
Domain:
Bacteria (66.67%)
|
9 | 8849 bp | 67.88 | 10.15 | 78.52 | |
PLM3_127_b2_sep16_scaffold_43594
Species:
RBG_16_RIF_WS3X_71_46_curated (50%)
|
8 | 6007 bp | 67.40 | 6.99 | 78.66 | |
PLM3_127_b2_sep16_scaffold_32378
Domain:
Bacteria (57.14%)
|
7 | 3941 bp | 70.54 | 7.50 | 78.94 |