ggKbase home page

PLM3_127_b2_sep16_scaffold_1984_16

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(19071..19976)

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV pilus assembly protein PilB Tax=Candidatus Nitrospira defluvii RepID=D8P8D4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 303.0
  • Bit_score: 439
  • Evalue 2.50e-120
putative type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 303.0
  • Bit_score: 439
  • Evalue 7.00e-121
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 301.0
  • Bit_score: 479
  • Evalue 2.30e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 906
CTGCCCACCTCAGGACAGGACGAAGATGTCGTGCTGCGCCTCCTTACGGCCAAGCAACCGATGCCGCTCGACGCGATGGAATTTGCACCCGCCATCTTGCAGGCCATTCAAGCCATCGCGGAGAAGCCGCACGGGATCATCTTGTGTGTCGGACCGACTGGGTCAGGCAAAACAACAACCTTGCACGCGATTCTCAAGCACATCAATACCGACGAACGAAAGATTTGGACGGCCGAAGACCCCATTGAAATAACCCAGAACGGTCTCCGCCAAGTCCAGGTCCATTCGAAAATCGGTCTCACCTTCTCGGTTGCGATGCGGGCGTTTCTGCGTGCCGACCCCGACGTCATCATGATCGGCGAGATGCGGGACAAAGAAACGGCCGACATCGCCATTGAGGCCTCGCTCACCGGCCACTTGGTGCTCAGTACCCTCCATACGAACAGTGCGGTTGAAACGGTGATCCGTTTGTTGGATCTCGGCTGCGACGCCTTCAACTTTGCCGACGCCATGTTGGGAGTGCTCGCCCAGCGCCTGTGCAAACGGATCTGTATCCAGTGCAAAGAGGCCTATCATCCGAGTCCACGGGAGTACGACGAACTGGTGCAGGGGTATGGGCTGCGCGAGTGGGAGCAATGGGGCGTCGCGGATGCCATGTCGATGACGCTGTACCGTGGACGCGGCTGCGAGGCCTGCAACAGGACCGGATTCAAAAACCGTGTTCCGCTCCACGAACTCTTGATTGGCTCGGAAGAGATGAAGAGCCGTATCCAGTCCAAAGCCCGCACAACCGAGATGCTGAGCGTGGCGATGCGGGAGGGCATGAGCACCTTGGTTCAGGACGGCATTCGGAAGGTGCTCCAGGGCGTGACAACATATCGGCAGGTCCGCTCTGTAGCGATATGA
PROTEIN sequence
Length: 302
LPTSGQDEDVVLRLLTAKQPMPLDAMEFAPAILQAIQAIAEKPHGIILCVGPTGSGKTTTLHAILKHINTDERKIWTAEDPIEITQNGLRQVQVHSKIGLTFSVAMRAFLRADPDVIMIGEMRDKETADIAIEASLTGHLVLSTLHTNSAVETVIRLLDLGCDAFNFADAMLGVLAQRLCKRICIQCKEAYHPSPREYDELVQGYGLREWEQWGVADAMSMTLYRGRGCEACNRTGFKNRVPLHELLIGSEEMKSRIQSKARTTEMLSVAMREGMSTLVQDGIRKVLQGVTTYRQVRSVAI*