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PLM3_30_b1_sep16_scaffold_84_26

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(26951..27634)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase Nep1 {ECO:0000256|HAMAP-Rule:MF_00554}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00554};; 16S rRNA (pseudouridine-N1-)-methyltransferase Nep1 {ECO:0000256|HAMAP-Rule:MF_00554}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 230.0
  • Bit_score: 200
  • Evalue 1.60e-48
Ribosomal RNA small subunit methyltransferase Nep1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I722_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 230.0
  • Bit_score: 200
  • Evalue 1.10e-48
ribosome biogenesis protein similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 230.0
  • Bit_score: 200
  • Evalue 3.10e-49

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 684
TTGTATTCACTCGTAATTGCTGAAGCAGCCATAGAAATAGTACCACAAATTCTGAGAAATCATCCATCTGTAAAGAATCACTCCAAAAGAGTTGGTAGAGATTCTAATGAGATTCTCTTAGATATTAGTTATCATCATAAAGCTATGGTTGAAAAAAATATGCAGGAATGGTGGAAGCGTGGTAGACCAGATATAGTGCATTTCGATCTGGTTGAAGCGCTCTCAACCCCATTATTTATGCAGAAAAAATTGCAAGTTTATGTCTCTACATTTGATAATAAATTAATAATAATAAATCAAGATCTGAGAATTCCAAAAAGTTATTTCAGATTTGAGAGACTGATGACTAGTATTTTTAACAATCACAAAAAGAAGAGCTCACCCAATTTAATAGATCTGAAAGAGAATGTTAGTTTTAATGATTTAATAGAGAAAATAATTAGACCAGATTTACTTTTTGGATTCTCTGTACAAGGAACAAAAAGCAAAATAAGTGATATTCTACTGCATAACGTAGTTAATAATTCTAAAAATTATTGTTTTGTAATCGGAGGCTTCCAAAGAGGACATTTTTCAGAAAGAATAAATCAAACATTTAACAACTTATTTTCGATTAGTCCCTATAGTTTGGAATCACATGTAGTTATTGCAAGAGTTCTGTATGAATGTGAAAATTATGTTTAG
PROTEIN sequence
Length: 228
LYSLVIAEAAIEIVPQILRNHPSVKNHSKRVGRDSNEILLDISYHHKAMVEKNMQEWWKRGRPDIVHFDLVEALSTPLFMQKKLQVYVSTFDNKLIIINQDLRIPKSYFRFERLMTSIFNNHKKKSSPNLIDLKENVSFNDLIEKIIRPDLLFGFSVQGTKSKISDILLHNVVNNSKNYCFVIGGFQRGHFSERINQTFNNLFSISPYSLESHVVIARVLYECENYV*