ggKbase home page

PLM3_30_b1_sep16_scaffold_4054_6

Organism: PLM3_30_b1_sep16_Bacteroidetes_Sphingobacteriia_43_6

near complete RP 48 / 55 MC: 4 BSCG 49 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(7519..7824)

Top 3 Functional Annotations

Value Algorithm Source
10 kDa chaperonin Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI90_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 96.0
  • Bit_score: 126
  • Evalue 9.10e-27
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 130
  • Evalue 8.80e-28
chaperonin Cpn10 similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 96.0
  • Bit_score: 126
  • Evalue 2.60e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCTAAGAATGCGAATTATGAGCTCTATGACGATAGGGTTCTAGTAAAACCCGCTCCAGCTGAGGAAAAGACGGCAGGCGGTATCATTATTCCTGACACTGCAAAAGAGAAGCCTCAGAGAGGAACTATTGTTGCAGTAGGCCCGGGGAAATATGCTGAACAAACCGGTAGCCTGATCCCTGTAAAGCAACAGGTAGGCGATATCGTATTGTATGGAAAGTATGCAGGAACTGAGGTTTCAGTTGACGGTGAAGATTACCTGATCATGCGTACTTCCGATATCCTAATGAAGGCACCACAGTAA
PROTEIN sequence
Length: 102
MAKNANYELYDDRVLVKPAPAEEKTAGGIIIPDTAKEKPQRGTIVAVGPGKYAEQTGSLIPVKQQVGDIVLYGKYAGTEVSVDGEDYLIMRTSDILMKAPQ*