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PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

PLM3_30cm_b2_sep2016_Bacteria_54_8
In projects: PLM3_30cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 301-350 of 377 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_30_b2_sep16_scaffold_10526
Domain: Bacteria (100%)
3 4274 bp 54.70 7.16 91.18
PLM3_30_b2_sep16_scaffold_8367
Domain: Bacteria (50%)
10 7190 bp 51.43 7.09 92.63
PLM3_30_b2_sep16_scaffold_9230
Domain: Bacteria (100%)
3 3489 bp 54.86 7.09 82.63
PLM3_30_b2_sep16_scaffold_27408
Domain: Bacteria (100%)
3 3195 bp 54.37 7.09 91.17
PLM3_30_b2_sep16_scaffold_9651
Phylum: Verrucomicrobia (62.5%)
8 4589 bp 54.76 7.09 93.44
PLM3_30_b2_sep16_scaffold_12134
Domain: Bacteria (75%)
4 3691 bp 54.35 7.07 90.87
PLM3_30_b2_sep16_scaffold_21254
Phylum: Verrucomicrobia (66.67%)
3 3933 bp 57.18 7.06 90.01
PLM3_30_b2_sep16_scaffold_15713
Phylum: Acidobacteria (50%)
4 3653 bp 56.97 7.06 83.93
PLM3_30_b2_sep16_scaffold_2846
Phylum: Verrucomicrobia (54.55%)
11 6017 bp 54.00 7.06 95.75
PLM3_30_b2_sep16_scaffold_11510
Species: Chthoniobacter flavus (100%)
6 5699 bp 53.54 7.05 94.12
PLM3_30_b2_sep16_scaffold_15176
Domain: Bacteria (100%)
6 3771 bp 53.81 7.04 83.05
PLM3_30_b2_sep16_scaffold_20314
Species: uncultured bacterium (75%)
4 3928 bp 54.00 7.03 84.39
PLM3_30_b2_sep16_scaffold_3203
Domain: Bacteria (83.33%)
6 6297 bp 56.04 7.00 90.52
PLM3_30_b2_sep16_scaffold_21580
Species: RBG_13_OP8X_37_8_curated (50%)
2 3342 bp 55.72 6.96 75.40
PLM3_30_b2_sep16_scaffold_34915
Species: uncultured bacterium (50%)
6 3303 bp 54.28 6.95 86.35
PLM3_30_b2_sep16_scaffold_12754
Domain: Bacteria (50%)
4 3306 bp 53.60 6.94 68.97
PLM3_30_b2_sep16_scaffold_1975
Phylum: Verrucomicrobia (66.67%)
6 7006 bp 54.15 6.92 75.41
PLM3_30_b2_sep16_scaffold_9983
Domain: Bacteria (87.5%)
8 5242 bp 54.69 6.92 82.30
PLM3_30_b2_sep16_scaffold_33084
Domain: Bacteria (75%)
4 3293 bp 54.45 6.88 86.18
PLM3_30_b2_sep16_scaffold_5206 4 4576 bp 52.53 6.88 40.12
PLM3_30_b2_sep16_scaffold_9668 8 6899 bp 53.04 6.87 86.06
PLM3_30_b2_sep16_scaffold_6042
Phylum: Verrucomicrobia (50%)
4 4279 bp 54.71 6.87 91.98
PLM3_30_b2_sep16_scaffold_12435
Domain: Bacteria (60%)
5 4792 bp 53.48 6.86 100.04
PLM3_30_b2_sep16_scaffold_6102
Domain: Bacteria (50%)
4 4258 bp 55.28 6.83 80.81
PLM3_30_b2_sep16_scaffold_24688
Domain: Bacteria (87.5%)
8 4705 bp 53.26 6.79 81.11
PLM3_30_b2_sep16_scaffold_18107
Order: Bacillales (50%)
4 3256 bp 54.67 6.77 89.37
PLM3_30_b2_sep16_scaffold_3979
Domain: Bacteria (100%)
6 5193 bp 54.34 6.76 79.15
PLM3_30_b2_sep16_scaffold_4744
Domain: Bacteria (66.67%)
6 5461 bp 54.29 6.70 89.21
PLM3_30_b2_sep16_scaffold_15625
Domain: Bacteria (100%)
3 6234 bp 56.64 6.69 92.20
PLM3_30_b2_sep16_scaffold_6954
Domain: Bacteria (57.14%)
14 7668 bp 53.63 6.63 85.17
PLM3_30_b2_sep16_scaffold_9384
Domain: Bacteria (100%)
3 3461 bp 56.17 6.63 87.37
PLM3_30_b2_sep16_scaffold_7264
Domain: Bacteria (80%)
5 3917 bp 54.81 6.62 88.61
PLM3_30_b2_sep16_scaffold_26881
Phylum: Verrucomicrobia (66.67%)
3 3517 bp 54.59 6.61 90.93
PLM3_30_b2_sep16_scaffold_12900
Species: Chthoniobacter flavus (50%)
6 3707 bp 53.95 6.60 80.28
PLM3_30_b2_sep16_scaffold_5707
Species: Chthoniobacter flavus (50%)
4 4382 bp 54.20 6.57 93.18
PLM3_30_b2_sep16_scaffold_8853
Domain: Bacteria (100%)
4 3565 bp 53.97 6.56 92.57
PLM3_30_b2_sep16_scaffold_22655
Class: Verrucomicrobiae (50%)
4 3965 bp 56.27 6.54 91.40
PLM3_30_b2_sep16_scaffold_14947
Species: uncultured bacterium (80%)
5 3650 bp 52.99 6.53 76.11
PLM3_30_b2_sep16_scaffold_12763
Domain: Bacteria (60%)
5 5240 bp 52.02 6.53 94.87
PLM3_30_b2_sep16_scaffold_22780 8 4917 bp 53.24 6.53 63.45
PLM3_30_b2_sep16_scaffold_19787
Domain: Bacteria (83.33%)
6 3934 bp 53.91 6.52 84.72
PLM3_30_b2_sep16_scaffold_20509
Species: uncultured bacterium (66.67%)
6 3965 bp 54.45 6.51 73.47
PLM3_30_b2_sep16_scaffold_7118
Domain: Bacteria (75%)
8 10688 bp 52.64 6.51 93.72
PLM3_30_b2_sep16_scaffold_13751
Domain: Bacteria (80%)
5 3831 bp 52.15 6.50 76.74
PLM3_30_b2_sep16_scaffold_28962
Domain: Bacteria (60%)
5 3587 bp 55.42 6.44 91.58
PLM3_30_b2_sep16_scaffold_3837
Phylum: Verrucomicrobia (80%)
5 7189 bp 55.92 6.43 91.14
PLM3_30_b2_sep16_scaffold_36192
Domain: Bacteria (71.43%)
7 3056 bp 51.28 6.43 85.90
PLM3_30_b2_sep16_scaffold_2504
Species: Chthoniobacter flavus (50%)
6 10308 bp 55.07 6.40 98.25
PLM3_30_b2_sep16_scaffold_35730
Species: Chthoniobacter flavus (50%)
6 3037 bp 53.38 6.37 91.67
PLM3_30_b2_sep16_scaffold_26320
Phylum: Verrucomicrobia (60%)
5 3441 bp 55.25 6.32 87.24
Displaying items 301-350 of 377 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.