ggKbase home page

PLM3_30_b2_sep16_scaffold_561_4

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 3593..4216

Top 3 Functional Annotations

Value Algorithm Source
Blue (Type 1) copper domain protein bin=GWC2_Chloroflexi_73_18 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 99.0
  • Bit_score: 64
  • Evalue 8.70e-08
blue (type 1) copper domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 97.0
  • Bit_score: 60
  • Evalue 4.60e-07
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 199.0
  • Bit_score: 190
  • Evalue 1.90e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCGGCCAGCAGGCAGGAGACGGAAGGCATCCGCGGCGGCCGGGGTCGTGTTGCTCGGGGCGATCGTGCTTGTCCCCGTCCTCGGGCACGGCCTCGCGTCGGCGAGCGGTGGGGGCGGGTGCGGCCGGCCGGTGACGGACGCCGAGGGGACCGGGGTCGACATCCGGGACTTCTGCTTCTCGCCGACGATCCTGCGGGTGTCGACGGGCGAGGACGTGACGTTCACCAACGTCGACCCGTTCCCGCATTCGGTCCTCGGCGCGAACGCGACCTGGGGCGACTACGCGGGCTTCAAGAAGAGGTCGGTCACGTACCGGTTCTCCGAGCCGGGCGTGTACCCGTACGTGTGCACCTACCACCTCGGGATGGTCGGCGTGGTGGTCGTAGGCGACGGCGTCGGCGGTGCGATCGACACGCCGACCGCGGACGGCCCCGTCACGAAGGTGGACGCCTCCGACCTCGCGCTCGAGAACGCGTCGGCCGTCGACCCTCAGCCGTCGGATGCCGACGGCGGGTGGGCCGTGATCGTGGCCGCTGCCTTCGGGATCGTGGTCGGCGTGTTGGCCGTGATCGTCGTGCGTCGGCGGCGTTCGTCGGCCACGCGTGCGGTGGTGGGTCGGTAG
PROTEIN sequence
Length: 208
MRPAGRRRKASAAAGVVLLGAIVLVPVLGHGLASASGGGGCGRPVTDAEGTGVDIRDFCFSPTILRVSTGEDVTFTNVDPFPHSVLGANATWGDYAGFKKRSVTYRFSEPGVYPYVCTYHLGMVGVVVVGDGVGGAIDTPTADGPVTKVDASDLALENASAVDPQPSDADGGWAVIVAAAFGIVVGVLAVIVVRRRRSSATRAVVGR*