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PLM3_5_b1_sep16_scaffold_172_6

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 4290..4700

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 136.0
  • Bit_score: 125
  • Evalue 3.80e-26
Ribonuclease VapC Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W041_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 136.0
  • Bit_score: 125
  • Evalue 2.70e-26
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 123
  • Evalue 3.80e-26

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Taxonomy

Coleofasciculus chthonoplastes → Coleofasciculus → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGATCGTTCTCGACACAAATATCGTGGCGGCCCTGATGGCCAATGGAGCGGACATCGACCCCTGGCTTGCAACCGTCCCGCGGCACGAGCTCTATACGACGGTCATGACTCGAGCAGAGATTCGCTACGGCCTCTCCCGACTCCCGGCAGGTAGACGCCGCAGCCGCCTCACTGACGAAGCTGATGCTTTGTTCAGCGAGACCGAGGAGCGCCTCCTGACTTTCGACGCCAAGGCAGCTGATCGCTATGGCGAACTTGTCGCCGCGCGCGAGCTTGCAGGCCGACCAATCTCAGTGGCCGACGCGATCATCGCCAGCATTGCGTGGGTTCATCGCGCGACTCTCGCAACGAGGAACAGCCGTGACTTCGATGATTGTGGACTGCAAGTCGTGAATCCCTACGGCTTCTGA
PROTEIN sequence
Length: 137
MIVLDTNIVAALMANGADIDPWLATVPRHELYTTVMTRAEIRYGLSRLPAGRRRSRLTDEADALFSETEERLLTFDAKAADRYGELVAARELAGRPISVADAIIASIAWVHRATLATRNSRDFDDCGLQVVNPYGF*