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PLM3_5_b1_sep16_scaffold_326_18

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 13876..15081

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor Tax=Janibacter sp. HTCC2649 RepID=A3TR83_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 400.0
  • Bit_score: 551
  • Evalue 4.50e-154
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGN28815.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 400.0
  • Bit_score: 562
  • Evalue 3.60e-157
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 402.0
  • Bit_score: 537
  • Evalue 2.50e-150

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Taxonomy

Knoellia flava → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
TTGACGCACGTCGAGGAGGTCTTCCGCGCCGAGTACGGTCGCGTGGTCGCCGGGCTGGTCCGCCGGTTCGGCGACATCGACCTCGCAGAGGAGGCACTCGCCGACGCGCTGCTCATCGCTCTCGAGCGCTGGCCACGCGACGGCGCACCTCCCAATCCGGCGGCCTGGCTGACCCGGGTCGCCGGCAACAAGGCGATCGACCGGCTGCGGCGCGAGAAGGTCCGCGACGAGAAGTACGCCGAGGCTGCCATGCTCCACGACGACACCCCTGCCGAACCCACCGGACCGGTGACGGACGACCGGCTCCGGCTCATCTTCACGTGCTGCCACCCAGCCCTCGCACCTGAGAACCGGATCGCGCTCACGCTACGGCTGCTAGGCGGCCTCACGGTCGCGGAAATCGCCCACGCGTTCCTCGTGCCAGAGACCACGATGGCGCAGCGGATCACCCGGGCGAAGGCGAAGATCAAGCAGGCGCGGATCCCCTACCGCGTGCCCATGGGCGACGACCTCTCGAACCGGATGGCCGGGGTCCTCGCCGTCCTCTACCTGATCTTCAACGAGGGCTACCTGTCCACGACCGCCGCGTCGGTGCGCGAGGACCTTTGCGCCGAGGCGATCCGGCTGACCCGGCAGCTGCGTGAGGCCAGCGCCTCTCTCGACCCGCAGCCGGAGGTGCTGGGGCTGCTCGCGCTCATGCTCCTGCTGGACGCCCGGCGCCCCGCCCGGGTGCGCGACGGCGTACTCGTCACTTTGCCCGACCAGGACCGCTCCGCCTGGAACTCCGATCAGATCGAGGAGGGGCATGCGCTGGTCCGCCAGTGTCTCGCCCTGAACCGGCCCGGGCCCTACCAGATCCAAGCGGCGATCAACGCGGTGCACACCGACGCACCCGACGCGTCGTCGGTCGACTGGTCGCAGGTGGTGGTGCTGTACGACCAGCTGGCGGCGCTGACGCCGTCACCGATCGTCGCGCTGAACCGCGCGGTCGCCGTGGCCGAGCTCGACGGACCGCAGGTGGCCCTGGCCATTGTCGACGACCTGGACCTGGGCTCGTACCACGCGTTCCACGCCACCCGCGCCGACCTGCTACGCCGGCTCGGCCGGTACGACGAAGCACGTGAGGCCTACGGCCAGGCGATCGCGCTGACCGAGAACGAGGCCGAGCGGGCCTGGCTCGCCGGCCGTCAGGCTTCGTGCGGGTAG
PROTEIN sequence
Length: 402
LTHVEEVFRAEYGRVVAGLVRRFGDIDLAEEALADALLIALERWPRDGAPPNPAAWLTRVAGNKAIDRLRREKVRDEKYAEAAMLHDDTPAEPTGPVTDDRLRLIFTCCHPALAPENRIALTLRLLGGLTVAEIAHAFLVPETTMAQRITRAKAKIKQARIPYRVPMGDDLSNRMAGVLAVLYLIFNEGYLSTTAASVREDLCAEAIRLTRQLREASASLDPQPEVLGLLALMLLLDARRPARVRDGVLVTLPDQDRSAWNSDQIEEGHALVRQCLALNRPGPYQIQAAINAVHTDAPDASSVDWSQVVVLYDQLAALTPSPIVALNRAVAVAELDGPQVALAIVDDLDLGSYHAFHATRADLLRRLGRYDEAREAYGQAIALTENEAERAWLAGRQASCG*