ggKbase home page

PLM3_5_b1_sep16_scaffold_59_23

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(26051..27655)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C347_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 530.0
  • Bit_score: 449
  • Evalue 3.20e-123
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 530.0
  • Bit_score: 449
  • Evalue 9.10e-124
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ38664.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 530.0
  • Bit_score: 449
  • Evalue 4.50e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphaerobacter thermophilus → Sphaerobacter → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1605
ATGGGAATGAATCTCACGAGTGTGGGACCACTCCCCCGCCAGTGGGCCGAGGAGTACGCCGCGCTATCGGCAAAGGACGACGAATTATCTGCGGAGGATCTGGAACGCTGTGCCGTCGCAGCTCATCTGCTTGGCGAGGATGAGCAGGTCGCCAGTCTCTTGGATCGTGCTCATCGTGGCTACCTCGAACGAGGGCTGCCTGGGCAGGCCGCACGGTGCGTCTTCTGGCTGGTCTTTCACCTCGGAAACGCGGGGCAGGCCGCGCGAGCGGCAGGTTGGCTGGCCCGGTTGCAACGCATCCTCGACGACCACGACCCCGACGGCAAGCTGTCCTACCTCGTCCTTCTCGTCGAGGGGGTGCGGCTGATGCAGTCCAGGGCAGCGGCTGAAGCCACTCCCCTGCTGGAGCGTGCCGCTACCGGCGCGCGCGTCGCCGGAGACGACGACGTCTTCGTACTGGCCGGCCTGGCCCGCGGACGCTGCCTGGTCTTCCAAGGCCAGACGACCGAAGCACTGGCCGCGCTGGACGAGATCATGGTGTACGTCGTAGCCGACCAGGTGGCGCCGCAGGTCGTCGGGATCGCGTACTGCTCGGTGATCTCCTTGTGCATGGAGCGCTTCGACGTGCAACGCGCAGGGGAATGGACCAACGCGCTCACCGGCTGGTGTGACGCGCAGTCGGGACTGGTGCCCTACCGCGGCACCTGCCAGGTCCACCGGGCCGAGATCTTCCAGTTGCATGGTTCATGGGCCGAGGCGACCGAGGAAGCAGCTCAGGTCAGCCAGCGACCGCCGGCCTTAGGCTCCGTGGCAGGCGCGGCGCATTACCGGTTGGCAGAGCTGCACCGACTACGAGGTCAGCTCGACTTGGCCGAGCGCTCGTACGCCGCCGCCGCTTCCTGCGGGCAGGAGGTGCAGCCTGGCCTCGCTCTGCTTCGAGTGGCACAGGGGAACTTGGCCGCTGGTATCGCCGGATTGGACCGTGCGCTGGCAGAGAACCGGGACACCGCGGCACGCCCGTTAATGCTCGCCGCCAAGGTGGAGATTGCGCTTGCGGCAGGATTGATCGATGCAGCTCGGACGGCACTTGCTGACCTCGAACAGAGCGCCGAGGCGATCCAGACCCCCTACCTGGCAGGGTTGAGGGCTCATGCCGCAGGCCAGCTCCGGATGGCAGACGGCGACGCACAAGCCGCCCTGTCGTTACTGAGACGGGCATGGACGCTGTGGCAGCAGGTCGACGCGCCATACGAGGCCGCCCGCACGCGGATCCACGTCAGTGCGGCGTGCCGGGCGCTCGGCGATGACGACGCGGCGCGGATGGAGCTCGACGCCGCTCGTACGGTCTTCGAGCAACTCGGCGCACGATCTGATCTGGCCGCGCTGGCTCAGACCAACGAAGCGGCTCCTGGCCACCCGCTGACCGCCCGCGAGTGCGAAGTGCTCGCCCTGGTGGCCCAGGGCCAGACGAACCGAGGCATTGCGACGGCCCTCTTCCTCAGTGAGAAGACAGTCGCCCGGCACCTCAGCAACATCTTCACCAAGATCAGCGTCAGTAGTCGGACCGCGGCGACGGCGTACGCGTACGAGCACGGACTCGTCTGA
PROTEIN sequence
Length: 535
MGMNLTSVGPLPRQWAEEYAALSAKDDELSAEDLERCAVAAHLLGEDEQVASLLDRAHRGYLERGLPGQAARCVFWLVFHLGNAGQAARAAGWLARLQRILDDHDPDGKLSYLVLLVEGVRLMQSRAAAEATPLLERAATGARVAGDDDVFVLAGLARGRCLVFQGQTTEALAALDEIMVYVVADQVAPQVVGIAYCSVISLCMERFDVQRAGEWTNALTGWCDAQSGLVPYRGTCQVHRAEIFQLHGSWAEATEEAAQVSQRPPALGSVAGAAHYRLAELHRLRGQLDLAERSYAAAASCGQEVQPGLALLRVAQGNLAAGIAGLDRALAENRDTAARPLMLAAKVEIALAAGLIDAARTALADLEQSAEAIQTPYLAGLRAHAAGQLRMADGDAQAALSLLRRAWTLWQQVDAPYEAARTRIHVSAACRALGDDDAARMELDAARTVFEQLGARSDLAALAQTNEAAPGHPLTARECEVLALVAQGQTNRGIATALFLSEKTVARHLSNIFTKISVSSRTAATAYAYEHGLV*