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PLM3_5_b1_sep16_scaffold_9_20

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(19442..20077)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B340CA similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 178.0
  • Bit_score: 220
  • Evalue 9.70e-55
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KGN36214.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 195.0
  • Bit_score: 199
  • Evalue 3.20e-48
RNA polymerase sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 181.0
  • Bit_score: 195
  • Evalue 1.20e-47

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Taxonomy

Knoellia subterranea → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGAACGTCTCGTCGGTGCCACCGGATTCGGAGGGTCAGCCCTCCCGATCCGCGCGGCATCGCAACACGTCGAGCGGTCGCGAGGCCGAGGCGGCTCATCTCGTCGACCTGATGACGCTCTGCTCTCGCGGCCACGAAGACGCATTCGCTGAACTGTACGATCTCACCTCCCAGCGCATCCATGGCATCATCCTGCGAGTTCTCCGCTCGCCCGATCATGCGGCCGAGGTGACCCAGGAGGTCTACGTGGAGGTGTGGCGGCAGGCCGCCCGCTACTCACCGGACAAGGGCAGCGTCATTGCCTGGATGACGACCATGGCGCATCGGCGCGCTGTCGATCGGGTGAGGTCGGTCTCGAGCGAGATGGCCCGGGACGAGCGATACGCCTTCCACGGCGGCGATCGCGAGATCGATCAGGTGTGGGACGGCGTGGAGCAACGACTCGATATTGAGAGGGTAAGGAAGGGTATGGCCTCATTGACCGCGATCCAGCGGGAGGCGCTGACGCTCGCCTATTTCGGTGGCTATACCCAAAGCCAGGTGGCGCAGCTGCTGAAGCTGCCCCTTGGCACGGTCAAAACCAGAATCCGTGATGGGCTGATCGGGCTCCGAGACGCGTTGGGGGTGGAAGCATGA
PROTEIN sequence
Length: 212
VNVSSVPPDSEGQPSRSARHRNTSSGREAEAAHLVDLMTLCSRGHEDAFAELYDLTSQRIHGIILRVLRSPDHAAEVTQEVYVEVWRQAARYSPDKGSVIAWMTTMAHRRAVDRVRSVSSEMARDERYAFHGGDREIDQVWDGVEQRLDIERVRKGMASLTAIQREALTLAYFGGYTQSQVAQLLKLPLGTVKTRIRDGLIGLRDALGVEA*