ggKbase home page

PLM3_5_b1_sep16_scaffold_2145_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 5349..5642

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED9D similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 60.0
  • Bit_score: 54
  • Evalue 4.20e-05
DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 59
  • Evalue 4.80e-07
DNA binding domain-containing protein {ECO:0000313|EMBL:AIJ21807.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 59
  • Evalue 2.40e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGGAGACGCAGATGGGCGCAGCACCCATCCCCGCTTCGGCGGGAGCTGTGGCGGAGGTCGCGGCCCGCGAGCGCTACCTCAACCCGGACGAGGCCGCCGAGTACCTGAATGTGTCGGTGGGCTTCATCCGCCGGATGGCGTCGGAGCGGCGAGTCCGGCATTACCGGTTGGGGAAGTTCATCCGCTTCGACCCGGCGGACCTCGACGCGTTCGCCGAGGTCAAGGAGCCGCTGACTGGGCCTGACCCGGCGCTGGTCACACAGGTGTGGCGACGGAGCCGGAGGCTTAGCTGA
PROTEIN sequence
Length: 98
METQMGAAPIPASAGAVAEVAARERYLNPDEAAEYLNVSVGFIRRMASERRVRHYRLGKFIRFDPADLDAFAEVKEPLTGPDPALVTQVWRRSRRLS*