ggKbase home page

PLM3_5_b1_sep16_scaffold_2953_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2557..2862)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T5K1_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 1.70e-25
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 4.80e-26
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADL43856.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 2.40e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGGCGAGCCGCGCGAGGCTGTCGACCTTGCTCGCGTCGACCGCACCCTGGCCGAGCGGGAAGGACTGTCCGCGCTGGTTGCCGAAGCGTTAGTCATGGAAGCTCACGGACAGGCCCGGGCGGGCAACTCAGCACCGTGCGCAGCTGCACTCGGTGCCGCCGAGATCGCATTAGACCGGGCGGACCGCAGCAGCGACCCGCACTGGATCGGCTACTTCGATGAGGCTTACATGTCGTCCAAGTTCGGCCATTGTCTGCGCGAGCTCGGTGACTACCGGCACGCGATCAAGTTCGCCTTCAGATGA
PROTEIN sequence
Length: 102
MGEPREAVDLARVDRTLAEREGLSALVAEALVMEAHGQARAGNSAPCAAALGAAEIALDRADRSSDPHWIGYFDEAYMSSKFGHCLRELGDYRHAIKFAFR*