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PLM3_5_b1_sep16_scaffold_4009_10

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(5236..5382)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial Tax=Nocardiopsis halotolerans RepID=UPI00036D9EB9 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 44.0
  • Bit_score: 58
  • Evalue 1.90e-06
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EUA12796.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 45.0
  • Bit_score: 55
  • Evalue 1.70e-05
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 44.0
  • Bit_score: 53
  • Evalue 1.00e-05

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Taxonomy

Mycobacterium kansasii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 147
GGCGTCGTCATCACGGTCGACGCGAAGCCCGTGGCGATCGTGGGCTTCATCGTTGTGGACGGCAGGATCGCCGCGATCGATGGGCTCGCTGATCCGGAGCGGATCGGCGCCCTCGACCTCGGGTTCCTCGACGACTGGTCCGGCTGA
PROTEIN sequence
Length: 49
GVVITVDAKPVAIVGFIVVDGRIAAIDGLADPERIGALDLGFLDDWSG*