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PLM3_5_b1_sep16_scaffold_2053_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2741..3409

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Frankia sp. BMG5.12 RepID=UPI0003704004 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 211.0
  • Bit_score: 229
  • Evalue 2.90e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 219.0
  • Bit_score: 225
  • Evalue 8.90e-57
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 218.0
  • Bit_score: 250
  • Evalue 1.70e-63

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAGCGCGCCGGTCGCCGGCTCCGCCACCTCGGCGGACGACCTGGAGCTGCTGGCCCGGCTGCGCCGTGGCGACGAGGCGGCGTTCACCCAGCTGGTCGAGCGGCTCCACGGCCCGATGCTGCGGGTGGCCATGATCCACGTCGGCAACCGGGCCGTGGCCGAGGAGGTCGCCCAGGACGCCTGGGTCGGGGTGCTGGCCCAGCTGGACCGGTTCGAGGGGCGCTCGTCGCTGCGGACCTGGGTCCTGCGGATCGTCGCCAACCGGGCCAGGACCCGGGCCGTGCGTGAGCGCCGCACCCTCCCGTTCTCCTCCCTCGACGGCGCGGAGGAGCCCGGCCGGCCGGCGGTCGAGCCGGAGCGGTTCCTGCCCGCCGGCCACCGCTGGGCCGGCCACTGGGCGTCGCCGCCACGCTCGTGGGGCGACGTGCCCGAGGAGCGGCTGCTGTCGGCCGAGACCCGGGCCGAGGTCGGGCGGGCCGTCGAGCTGCTGCCGCCTGCTCAGCGGGCGGTGATCACCCTGCGCGACGTCGAGGGGATGACCGCCGCCGAGACCTGCGAGCTGCTCGAGCTGACCGAGGGAAACCAGCGGGTACTGCTCCACCGGGCCCGGTCAAGGGTGCGCCGGGCGCTGGAGCGGTACCTGGACGAGACCGAGGTGGCCCGATGA
PROTEIN sequence
Length: 223
MSAPVAGSATSADDLELLARLRRGDEAAFTQLVERLHGPMLRVAMIHVGNRAVAEEVAQDAWVGVLAQLDRFEGRSSLRTWVLRIVANRARTRAVRERRTLPFSSLDGAEEPGRPAVEPERFLPAGHRWAGHWASPPRSWGDVPEERLLSAETRAEVGRAVELLPPAQRAVITLRDVEGMTAAETCELLELTEGNQRVLLHRARSRVRRALERYLDETEVAR*