ggKbase home page

PLM3_5_b1_sep16_scaffold_10848_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(3618..4358)

Top 3 Functional Annotations

Value Algorithm Source
Haloacid dehalogenase, IA family protein bin=GWC2_Chloroflexi_73_18 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 211.0
  • Bit_score: 129
  • Evalue 3.40e-27
HAD-superfamily hydrolase similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 227.0
  • Bit_score: 118
  • Evalue 1.70e-24
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 186.0
  • Bit_score: 148
  • Evalue 1.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGAGTCGTCTGCCCCCCATTCCGGATCCGCTCGATTGCGTCCTGTTCGACGCCGGCGACACGCTGCTGGCTCCCGCGCCGAGCTTCCAGGGACGGTTCGTGGCCGTGGCCGCCGACCAGGGCCTGCCGCTGGAGGAGGCGGCCGCCGCCGTCGCCGTCGCCGACGCCGTGCGGGCCGCGGCCTGGCCGGACGACTGGACCGACCCGGCCACCCAGCGCGAGTTCTGGATGGGGTTCTACCGGAACGTCCTGGCCACCCTTGGCCATGCCGAAGGACTGGAGCTGGCCGAGGCGTTGTTCGCGTCCTTTAGCGACCCGGCCTCCTACCAGCTGTTCGACGACGTCCGGCCGGCCCTCGACGAGCTGACCGGGCGGGGCATCACCCTCGGGGTGGTGTCCAACTTCGAGCCCTGGCTGGCCGACATCCTCGCCCTCCAGGAGGTCGACCACCTGTTCGCGACGGTGGCCATCTCGGGCGTGCTCGGGGTGGCCAAGCCCGACCCGCGGATCTTCGAGGCCGCCCTGGCCGGGGCCGGGGCCGACCCCTCGGCGACCGTGCACGTCGGCGACCAGCCGGCCAACGACGTGGCCGCGGCCCGGGCGGTCGGCATCACCCCGGTCCTGATCGACCGCTTCGCCCGGCACCCGGAGCCCGACGACGCCCACCGGGTCGAGGACCTCGCGGGCCTGGTGCAGCTCGTGAAGGTTAACGCCTCAGGGAACGGGCAGAGGTCGGGTTGA
PROTEIN sequence
Length: 247
MSRLPPIPDPLDCVLFDAGDTLLAPAPSFQGRFVAVAADQGLPLEEAAAAVAVADAVRAAAWPDDWTDPATQREFWMGFYRNVLATLGHAEGLELAEALFASFSDPASYQLFDDVRPALDELTGRGITLGVVSNFEPWLADILALQEVDHLFATVAISGVLGVAKPDPRIFEAALAGAGADPSATVHVGDQPANDVAAARAVGITPVLIDRFARHPEPDDAHRVEDLAGLVQLVKVNASGNGQRSG*