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PLM3_60_coex_sep16_scaffold_0_30

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 32572..33129

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor Tax=Sulfuricella denitrificans skB26 RepID=S6A9F8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 162.0
  • Bit_score: 142
  • Evalue 3.80e-31
rpoE8; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 162.0
  • Bit_score: 142
  • Evalue 1.10e-31
Tax=RBG_16_Betaproteobacteria_66_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 164.0
  • Bit_score: 152
  • Evalue 5.20e-34

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Taxonomy

RBG_16_Betaproteobacteria_66_20_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTCGCTCCGAGCTCCGGGCGCGCGCATTGATCGCGCATTGATGATGACGCCCGACCGCCAGCGCGCCATCGTTGAGGTTATGCCCCATCTGCGGCGATATTCGCGCGCGCTCACGCTGAACCTCGATGCGGCGGACGAGCTGGTGCAGGATTGCCTGGAACGGGCCCTGAACAAGATCCATCTGCTGAAGGACGAGACACGGCTGCGGCCGTGGCTGTTCACGGTCATGCTGAACATTTTCCGCAACCAGCTCCGGCGCAGTCGAAACGGCCCGCAGCTGGTGGCGATCGACAGCGAGCAGATTCCGGCGAACTCTGCCCCCACGGTGGAACAGGGCGCGGAGGTAAAGCTGATCCTGGCGCTGCTGGGACAGCTGCCCGAGGACCAGCGGGAAGTGCTAACTTTGGTTGCGCTGGAGGAAGTGAGCTATCAGCAAGCGGCGGAGATCCTGGAGGTGCCGATCGGCACGGTCATGTCACGGCTGGCGCGGGCGCGGGAGCGCCTGCGCACGATGATGGATTCCGGAGTCCAGGCGAAACGGCATGGCAATGACTAA
PROTEIN sequence
Length: 186
MSLRAPGARIDRALMMTPDRQRAIVEVMPHLRRYSRALTLNLDAADELVQDCLERALNKIHLLKDETRLRPWLFTVMLNIFRNQLRRSRNGPQLVAIDSEQIPANSAPTVEQGAEVKLILALLGQLPEDQREVLTLVALEEVSYQQAAEILEVPIGTVMSRLARARERLRTMMDSGVQAKRHGND*