ggKbase home page

PLM3_60_coex_sep16_scaffold_20_28

Organism: PLM3_60_coex_sep16_Acidobacteria_65_11

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 17697..18236

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 178.0
  • Bit_score: 279
  • Evalue 1.50e-72
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 182.0
  • Bit_score: 219
  • Evalue 4.00e-55
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 179.0
  • Bit_score: 322
  • Evalue 2.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCTCGAATCGGCAAGAAACCAATAGCGATCCCCAAGGGCGTCAAGATCGACGTCCAGCCGGGCCTCGTCGAAATCAAGGGGCCGAAGGGCACGCTGCGCCAGGCGCTGCCCCCCGGGATCGGCTTCGAGCTCGAGGGCGACCTGCTCAACGCGCGAACGCTTCGGGAGGACGCGCAGCTCGGCAAGTTCCACGGCCTTGCCCGCAGCCTGGTCGCCAACGCCGTCCGCGGTGTGACGGAAGGCTTTCGCAAGGACCTCGACATCGTCGGCGTCGGGTACCGCGCCGAGGTGAAGGGCAAGCAGGTCGTGTTTGCGCTGGGCTATTCGCATCCGGTCGTGTTCGAGATTCCGACCGGCATCGATATCGCGATCGACAAGCAGACGCACATCACCGTGACCGGCGTCGACCGCCAGCAGGTCGGGCAGGTGGCCGCCAATATCCGGCGGCTGAGAAAGCCCGATCCCTACAAGCAGAAGGGCGTTCGCTACACGGGTGAAGTGCTGAAGAAGAAGGCCGGAAAGACGGGAGCGAAATAG
PROTEIN sequence
Length: 180
MSRIGKKPIAIPKGVKIDVQPGLVEIKGPKGTLRQALPPGIGFELEGDLLNARTLREDAQLGKFHGLARSLVANAVRGVTEGFRKDLDIVGVGYRAEVKGKQVVFALGYSHPVVFEIPTGIDIAIDKQTHITVTGVDRQQVGQVAANIRRLRKPDPYKQKGVRYTGEVLKKKAGKTGAK*