ggKbase home page

PLM3_60_coex_sep16_scaffold_4400_12

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 10187..10720

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 174.0
  • Bit_score: 209
  • Evalue 5.30e-52
Peptide deformylase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 256
  • Evalue 1.70e-65
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 265
  • Evalue 3.10e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTAAACTCAAAGTCACCCGCCTCGGTCATCCAGTGTTGCGCGAAATTACGAAAGATATTTCCGTCAAAGAACTAAAGACCGCGGCCATGCAGAAATTCATCGACGACATGATCGAGACCATGAAGGAATACGACGGCGTCGGCTTGGCAGCCGATCAGGTGTTCACTTCCAAGCAGGTGGCCGTGTTCGAAGTCGCCGACAATCCGCGCTACCCCAACAAAGCGAAAGTGCCGTTGACCGTTCTGGTGAATCCAAAAATCACGCCGCTCTTCGATGAGATGGAAGAGGACTGGGAAGGCTGTCTCAGTATTCCCGATCTGCGCGGTCGAGTGCCGCGCTACAAGAGCATCCACGTCCAAGCACGAGATCGGGACGGCAACAAATTGGACTTCGACGCCCACGACTTCCACGCCCGCGTCATCCAGCATGAGTTCGATCATCTCAACGGCAAGGTCTATCTCGACCGCATGCGTGACTTCACGACACTCACGTTTCTGCAGGAGTTCGGGAGATATTGGATGGGGAAGTGA
PROTEIN sequence
Length: 178
MSKLKVTRLGHPVLREITKDISVKELKTAAMQKFIDDMIETMKEYDGVGLAADQVFTSKQVAVFEVADNPRYPNKAKVPLTVLVNPKITPLFDEMEEDWEGCLSIPDLRGRVPRYKSIHVQARDRDGNKLDFDAHDFHARVIQHEFDHLNGKVYLDRMRDFTTLTFLQEFGRYWMGK*