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PLM3_60_coex_sep16_scaffold_9154_4

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 4052..4363

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHQ9_THEYD similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 84.0
  • Bit_score: 76
  • Evalue 1.10e-11
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 84.0
  • Bit_score: 76
  • Evalue 3.10e-12
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 87.0
  • Bit_score: 95
  • Evalue 3.20e-17

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Taxonomy

RLO_Nitrospinae_45_22 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 312
ATGAAACGGGGAAAAGCTGTAACGTTCGACCTAAAATTATCCGAGGAGATGAAGCGCCCGCGCTTTGCCGCGTCCTTCCGCAAAGAGCTTAGTCGCATCAGGCTAGCGGATCAAATAACCGAACTCAGAGAAAAACATGGTTGGTCGCAGGCCGATCTTGCGCGCAAGGTGGGAACTACTCAATCCGGGATAGCGCGCCTTGAGAACCCCAACTACCGCAATTACTCTCTGGCGACTTTGGAAAAAGTCGCGACCGTATTAGGCGCACGATTGGTCGTGGGACTGGAAGCAATCGGTCGCCACGCCGCGTAA
PROTEIN sequence
Length: 104
MKRGKAVTFDLKLSEEMKRPRFAASFRKELSRIRLADQITELREKHGWSQADLARKVGTTQSGIARLENPNYRNYSLATLEKVATVLGARLVVGLEAIGRHAA*