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PLM3_60_coex_sep16_scaffold_9284_11

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(8205..8849)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XC38_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 176.0
  • Bit_score: 124
  • Evalue 9.50e-26
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62506.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 176.0
  • Bit_score: 124
  • Evalue 1.30e-25
RNA polymerase, sigma-24 subunit, ECF subfamily-like hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 146.0
  • Bit_score: 91
  • Evalue 2.50e-16

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 645
ATGCGCGCACTCTGGTCAATCGTATTTACACTCTGGGGCGTTCTCGCCATGGCGCAAGACAATCCGTGTAATAAGTCTGGGGTCAGCCCCGACCAGACGTGGAACCCTCCGAACAGTGCGGTCACATCAGAACTTCGCAAGTTTTATGATCTCGGACGTCAACTAGGCAAGTTAGTCGAAGCAAAGCGCTTTGACTCCGTCAACGCCGTTGCCGTGGAATATCTAGCGGCCGCTGAGAAGTACAAGTGCAATTGGAACTACGGCAACGCGATCCACGATGCGAACTCGGCGTTGGGCATGCGTGAATTTGCGTTAGGAAACATTGATGCCGCAAAGACACATTTACTGGCGGCTGGCAAGTCTCCGGGGTCTCCGCAATTGAACTCCTTTGGCCCCGAACCCTATCTCGCCGATGCACTACTCAAACGTGGAGCTTCGAAGGAAGTGACGGAGTATCTAATGGGAGTAAGCCGCTTCTGGAAGCTTGATCACGGCGTGGTTGCTCACTGGTTGTCTCGAATCGAACGCGGAGATCGTCCAACGCTCTCCAGCTTTGAGGCAATGCGATGGTATGTTGAACGCGAGAAAGCTAACCGCTCGGCCGACCCCGACGCGCACAAGGGCGGCGCGCGCGGGTCGCCGTGA
PROTEIN sequence
Length: 215
MRALWSIVFTLWGVLAMAQDNPCNKSGVSPDQTWNPPNSAVTSELRKFYDLGRQLGKLVEAKRFDSVNAVAVEYLAAAEKYKCNWNYGNAIHDANSALGMREFALGNIDAAKTHLLAAGKSPGSPQLNSFGPEPYLADALLKRGASKEVTEYLMGVSRFWKLDHGVVAHWLSRIERGDRPTLSSFEAMRWYVEREKANRSADPDAHKGGARGSP*