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PLM3_60_coex_sep16_scaffold_9897_6

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 3805..4122

Top 3 Functional Annotations

Value Algorithm Source
RRM domain-containing RNA-binding protein bin=GWA1_Deltaproteobacteria_52_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 133
  • Evalue 1.00e-28
putative RNA-binding protein RbpA similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 108.0
  • Bit_score: 128
  • Evalue 7.00e-28
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 111.0
  • Bit_score: 144
  • Evalue 8.00e-32

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Taxonomy

R_RIF_OD1_03_48_11 → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGGAGCGAAGCTATATGTTGGGAATCTTCCCTACAACGTGACGGAAGATCGGCTGCAGCAACATTTTGCGCAGCATGGCTCGGTTGTGAGCGCGCGAATCATCACCGACAAGTTCAGCGGCCGTGCCAAAGGTTTCGGCTTCGTCGAGATGAGTTCGGATCAGGACGCCGTGAAGGCGATCAACGCGCTCAACGGCACCGACTTCGAGGGCCGCAATATCGTGGTCAGCGAAGCGCGCCCGCAAGCGCCGCGCGAACCGCGTCCCGGTGGTGGCGGCGGGTTCGGCGGTGGCCGGCCGCCGCGCGATCGCTATTGA
PROTEIN sequence
Length: 106
MGAKLYVGNLPYNVTEDRLQQHFAQHGSVVSARIITDKFSGRAKGFGFVEMSSDQDAVKAINALNGTDFEGRNIVVSEARPQAPREPRPGGGGGFGGGRPPRDRY*