ggKbase home page

PLM3_60_coex_sep16_scaffold_27222_1

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(211..1056)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter membrane protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 221.0
  • Bit_score: 360
  • Evalue 1.40e-96
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 269.0
  • Bit_score: 262
  • Evalue 1.10e-67
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 265.0
  • Bit_score: 410
  • Evalue 1.20e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAATACGAACGCAACACGCAATCAGCATCAGGTGGCGCCGCTACTCGGCGCCAGCGCCGGCTTCATCGCTCTAATCGCGCTGGTTGCTGTGTTCGCGCCGTGGATTTCACCTTACCCGGCCGGCGGCCTCGACGAGAAACGTCTGCTCGAATCACCGAGTTGGGCCCACTGGATGGGCACTGACGGACTCGGTCGCGACCTTTTCACGCGTGTGCTCTACGGCGCCCGTGTTTCTCTCGCCGTCGGACTCGGCACTTCGCTCATCGCACTATTAATCGGCACAATTTACGGCCTCATCGCGGGCTTCAGAGGCGGTAATTGGGATCACGCCATGATGCGCGTCGTCGATATTTTTTACGGCCTGCCCGACATGCTGATTTTTATTTTACTGTCGCTCTTGTTAGGCCGGAACATCGGTGGGCTGCTGATCGCTCTCGGGCTGGTCAGTTGGGTGCGCTTTGCGCGCATCGCGCGCGGGCAAGTGCTGCAAGCCAAAGAATATCTTTTCGTCGAAGGCGCCAGGTCGCTAGGCGCCTCGCGCCGGCGCATCGTGCTGCGCCACATTTTGCCGAACATCGTCGGCCCAATCATCGTCACGCTTACGTTTAGCATTCCGGCGGCGATCCTCGCCGAATCGACCTTGAGCTTCATCGGCATCGGCATCAACGATCCCTACAGCGCTTGGGGCACCAGTTGGGGTACACTGGCGCAAGACGGCTATCGCGCCATGCGCAGCTATCCCCATGTGATCGCGTTCCCCGCGTCGGCGATATTTTTCACTATTCTCGCGTTCAACACGCTCGGCAATGGCGTGCGCGATTTGCTCGATCCAAAACAGAATTGA
PROTEIN sequence
Length: 282
MNTNATRNQHQVAPLLGASAGFIALIALVAVFAPWISPYPAGGLDEKRLLESPSWAHWMGTDGLGRDLFTRVLYGARVSLAVGLGTSLIALLIGTIYGLIAGFRGGNWDHAMMRVVDIFYGLPDMLIFILLSLLLGRNIGGLLIALGLVSWVRFARIARGQVLQAKEYLFVEGARSLGASRRRIVLRHILPNIVGPIIVTLTFSIPAAILAESTLSFIGIGINDPYSAWGTSWGTLAQDGYRAMRSYPHVIAFPASAIFFTILAFNTLGNGVRDLLDPKQN*