ggKbase home page

PLM3_60_coex_sep16_scaffold_56704_3

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 1521..1871

Top 3 Functional Annotations

Value Algorithm Source
CMP/dCMP deaminase, zinc-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 5.20e-26
dCMP deaminase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 96
  • Evalue 3.30e-18
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 64.0
  • Bit_score: 125
  • Evalue 2.50e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAGCGAGCGGCTAAGTTGGGATCAATACTTCATGACGATCACCTTACAGGTGGCCGAGCGCTCGACTTGCACCCGTGCCAAAGTTGGCGCGGTGATCGTGCGCGACAAAAACATCCTTGCCACCGGCTATAACGGCGCGCCGGCGGGCATGCCCCATTGCACCGATGTCGGTTGCTTGATTTACGAATCGTATATTACCCACACGCCGTGCATTCACTGCTTAAAGGTGCTGGTCAATACCGGGATCAAAGAAATATTCTATTTGAAGCCCTATAAACTCCACACCCTGGAAGAATTGTTGCGCTACACGCAAGTCCACCTGTACCCCGTTCAGTTGCCAGGCGAATAA
PROTEIN sequence
Length: 117
MSERLSWDQYFMTITLQVAERSTCTRAKVGAVIVRDKNILATGYNGAPAGMPHCTDVGCLIYESYITHTPCIHCLKVLVNTGIKEIFYLKPYKLHTLEELLRYTQVHLYPVQLPGE*