ggKbase home page

PLM3_60_coex_sep16_scaffold_1071_13

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(12536..13183)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y653_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 192.0
  • Bit_score: 185
  • Evalue 4.60e-44
Uncharacterized protein {ECO:0000313|EMBL:ETK31789.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 192.0
  • Bit_score: 193
  • Evalue 2.40e-46
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 192.0
  • Bit_score: 185
  • Evalue 1.30e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGCCGGAACCCGCGGTGGTGACCGCGGCAGTCGGCCGCAACGTCCGCGCCGAGCGCAGCCGCAAGGCATGGACGCTGGACGACCTTGCCGCCCGCTCGGGGGTCAGCAAGGGCATGCTCGTGCAGGTCGAGCAGGCCCGCTCCAACCCGAGCATCGCGACCATCTGCCGGCTGGCCACCGCGCTCGGCGTCTCGGTGTCCTCCCTGGTCGAGGCGCCGGAGGTACCGACAACGCGGGTGGTGCCCGCCGGCGCGGGGGTCCTGCTGTGGACCGGCAAGCCGGGCAGCACGAGCACGCTGCTGGTCGGGTCGGGCACCCGCGAGCAGGTCGAGCTGTGGGATATCCGCATGGCCCCGCACGACGGCTACGCCGGCGAGCCGCACCCGGCCGGCACCCGGGAGCTGCTGCTCGTCATCGAGGGCGAGCTGACCCTCGAGGTGGACGGGGTCGACTACCGGGTGCCGGAGGGAGGGGCGACCGCCTTCGTGGCCGACCGCCCCCACGCCTACCGCAACACCGGCGACGCGCCGCTGCGCTTCTCCATGACCGTCGTGCACAGCCCGGCGGCCAGGCTCCCCCATCCACCTCCGGCCGCCGAGGCGAGCCAGCCTGAACGGTCCGAGGCTCGGGCCGCTCAGCGCCCGTAG
PROTEIN sequence
Length: 216
VPEPAVVTAAVGRNVRAERSRKAWTLDDLAARSGVSKGMLVQVEQARSNPSIATICRLATALGVSVSSLVEAPEVPTTRVVPAGAGVLLWTGKPGSTSTLLVGSGTREQVELWDIRMAPHDGYAGEPHPAGTRELLLVIEGELTLEVDGVDYRVPEGGATAFVADRPHAYRNTGDAPLRFSMTVVHSPAARLPHPPPAAEASQPERSEARAAQRP*