ggKbase home page

PLM3_60_coex_sep16_scaffold_1553_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(299..883)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI000368A0EE similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 189.0
  • Bit_score: 94
  • Evalue 7.30e-17
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 193.0
  • Bit_score: 92
  • Evalue 1.30e-16
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 190.0
  • Bit_score: 106
  • Evalue 3.40e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Melainabacteria_34_12 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCGAGCGCTCCCGAAACCCGAGCGAAGCTGCTGGCCGCCGCCCGGCGGGCCTTCGCCGACCTCGGCTACGGCAAGGCCAGGGTGGAGGACGTCGTGAGCCGTGCCGGCGTCGGGCACGGCACCTTCTACGCCTACTTTCCCAACAAGCGGGCCGCGCTGGCCGCGCTCATCCACGAGAACGCGGCCACCCTGGTGGAGCTGGCCGGGCGGCCGTGGGGCGTCGGGGACGTGCGGGCGAGCCTCAGGTCGGTGCTGTCGGGGCTGGCCGACCTCTACGACGCCGACGCCGACCTGATCGGTCTGTGGACCGAGGCGTCCCTGGGCGACCCCGAGCTCGGGCGTGTGCTCGACGAGGTGCGGCGCCAGTTCGTGGCCCGCATCGCCCGCAACATCGAGCGAGCCGCGTCCCAGGGGCTGACCCGCCCGGTCGACGCCCACACCGCGGCGACCGCGCTCGCCGCCATGGCCGAGCAGACGATGTTCCTGCGCGCCGTGCGGGCCGAGCCGCTCGACCGCGAGCTCACCGTGGAGACCCTGGCCGACCTCTGGTATCACGCGCTCTACGTGGACCGCAGGGATTGA
PROTEIN sequence
Length: 195
MPSAPETRAKLLAAARRAFADLGYGKARVEDVVSRAGVGHGTFYAYFPNKRAALAALIHENAATLVELAGRPWGVGDVRASLRSVLSGLADLYDADADLIGLWTEASLGDPELGRVLDEVRRQFVARIARNIERAASQGLTRPVDAHTAATALAAMAEQTMFLRAVRAEPLDRELTVETLADLWYHALYVDRRD*