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PLM3_60_coex_sep16_scaffold_2701_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(3294..5015)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 578.0
  • Bit_score: 577
  • Evalue 2.00e-161
DNA topoisomerase 1 Tax=Geobacter sulfurreducens RepID=D7AKT1_GEOSK similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 578.0
  • Bit_score: 577
  • Evalue 1.40e-161
topA; DNA topoisomerase I similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 578.0
  • Bit_score: 577
  • Evalue 4.10e-162

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Taxonomy

Geobacter sulfurreducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1722
ATGATCGTCGACCGCGAGCGGGAGATCGACGCGTTCCGGGCCCAGGAGTACTGGAGCCTCGAGGCCGACCTGGCCACCGACGCCGATGAGGCCGTGCACGCCCGCTACCCGGTCGGCGAGAAGCAGCGGTTCGTGCTCGGCGACGAGGGCTCGGCGACCGCGGCCGCCGCGGCGGCCCGGGCGGCGACCTGGATCGTCCGGGACGTCACCAAGAGCGAGCGCAAGCGCAGCGCGGCCCCGCCCTTCACCACCTCCACCCTCCAGCAGGAGGCCTCGCGCAAGCTCGGCTTCTCGTCCAAGCGCACGATGGCGATCGCCCAGCAGCTCTACGAGGGCGTCGAGCTGCCCGGCGAGGGCTCGGTCGGGTTGATCACCTACATGCGCACCGACTCGCCGACGCTGTCGCAGACCGCCCAGAACGAGATCGCCGCGCTGGTGCGGGAGCGCTACGGCAGCCAGTACGTCCGCCCCACCCAGTACAAGACCAAGGCCAAGCTCGCCCAGGAGGCGCACGAGGCGATCCGGCCCGCCGGGGTCGGGCGCACCCCCGAGTCGCTGAACGGCCACCTCGAGCCGGCCCAGGGCAAGCTGTACGAGCTGATCTGGAAGCGGGCGGTGGCGTCCCAGATGGCCCAGGCCCTCTACGACCAGACCAGCGTCGACATCGAGGCGGGAGAGCTCGTCTTCCGGGCCTCGGGGTCGGTCATGCGCTTCGACGGCTTCGTCCGCGTCTACCTGGAAGGCCGCGACGACGACCTCGAGGAGGAGGCCGGCACCCTGCCCGAGCTCGCCGTCGGCCAGGTCCTGCGGCTCGTCGAGCTCACCCCCGAGCAGCACTTCACCGAGCCGCCGCCCCGCTACACCGAGGCCAGCCTGGTCAAGGCGCTCGAGGAGCACGGCATCGGCCGCCCGTCGACCTACTCGCCGACGATCTCGACGCTGCAGGAGCGCAAGTACGTGCGGCTGGACCGCAAGCGGTTCCACCCCGAGGACGTCGGCATCGTGGTCACCGACCTGCTCGCCGACGTCTTCCCCAAGGTCGTCGACCTCGGCTTCACGGCCGAGATGGAGGAGGACCTGGACCGGATCGCGAGCGGCTCCAAGGCGTGGGAGCCGCTGGTCAAGTCCTTCTTCGACGAGGTCGAGGGGACCATCGCCGAGCGCCAGGAGAAGGTCTCCCGTCCCGAGGAGGCGACCGACGAGACCTGCCCCGAGTGCGGCGAGGAGACCGGCGCGAAGCTGGTCCGCAAGTGGGGCCGGTACGGCTGGTTCCTGTCGTGCAGCCGCTATCCGGACTGCAAGTACCGGCGCAACGCCAAGCAGTCGGCCGAGCAGGCCGCCGAGCAGGTCGAGCCCGAGCTGACCGACGTGCCCTGCCCGAAGTGCGGCAAGCCGATGATCAAGCGCAGCGGCCGCTTCGGCCCGTTCCTGGGCTGCTCGGACTACCCCAAGTGCCGGGGCATCAAGAACCTCGGCGAGCAGTCGTTCGGCACCTGCCCGAAGTGCGGCAGCGGCGAGGTCGTCTCCAAGCGGACCAAGAAGGGCAAGACGTTCTACAGCTGCAACCGCTATCCCGACTGCGACTTCGCCCTCTGGCAGGCGCCGCTGGCCCAGAAGTGCCCCACCTGCGGCGGTCTGCTCGCCCCCGACAAGGACGGCAACACCGCGACCTGCGCCAAGTGCGGCAGCCAGGTCCAGGTGGCAGAGCTGGTCAGCGTGTAG
PROTEIN sequence
Length: 574
MIVDREREIDAFRAQEYWSLEADLATDADEAVHARYPVGEKQRFVLGDEGSATAAAAAARAATWIVRDVTKSERKRSAAPPFTTSTLQQEASRKLGFSSKRTMAIAQQLYEGVELPGEGSVGLITYMRTDSPTLSQTAQNEIAALVRERYGSQYVRPTQYKTKAKLAQEAHEAIRPAGVGRTPESLNGHLEPAQGKLYELIWKRAVASQMAQALYDQTSVDIEAGELVFRASGSVMRFDGFVRVYLEGRDDDLEEEAGTLPELAVGQVLRLVELTPEQHFTEPPPRYTEASLVKALEEHGIGRPSTYSPTISTLQERKYVRLDRKRFHPEDVGIVVTDLLADVFPKVVDLGFTAEMEEDLDRIASGSKAWEPLVKSFFDEVEGTIAERQEKVSRPEEATDETCPECGEETGAKLVRKWGRYGWFLSCSRYPDCKYRRNAKQSAEQAAEQVEPELTDVPCPKCGKPMIKRSGRFGPFLGCSDYPKCRGIKNLGEQSFGTCPKCGSGEVVSKRTKKGKTFYSCNRYPDCDFALWQAPLAQKCPTCGGLLAPDKDGNTATCAKCGSQVQVAELVSV*