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PLM3_60_coex_sep16_scaffold_4207_7

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(6235..6810)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Amycolatopsis mediterranei RepID=D8I877_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 197
  • Evalue 7.90e-48
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EXG79927.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 198
  • Evalue 5.00e-48
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 197
  • Evalue 2.20e-48

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAGGAGACCGCCGAGCTCGTCCGGGCCGCGGGCACGGGCGACCAGCGGTCCTGGGACGCGCTCGTCGAGCGGTTCAGCGGACTGCTGTGGGCGGTGGCGCGGGCGCACCGCCTGCGGGAGGCCGACGCTGCGGACGTCGTCCAGACCACCTGGCTCAACCTCGTGCAGCACCTCGGGAGCATCCGCGAGCCCCAGCACGTCGGCGCCTGGCTGGCCACCACCGCGCGCCGGGAGTGCCTGCGCGCCCTCAACCGCGACCAGCGGCAGGTGCTGACCGACGACGAGGCCGGCCTGCAGGTCCGTGAGCCGCCGCCGGCCACGCCCGAGGAGGACGTCCTCGCGGCGGAGCGCCTGGCGCTGCTCCGGGCCGCCCTCGAGGAGCTGCCGCCCCGCTGCCAGCAGCTCCTGCGCGTGCTCACCGCCGACCCTCCGCCGAGCTACGAGCAGGTGAGCGCGGCCCTGGGCATGCCGGTCGGCAGCATCGGCCCGACCCGCGCGCGCTGCCTGGACCGGCTGCGCCACGCCGCCCGGCTGGCCGGTATCGTGCCCACCACGGGCGCCTCCGTGCAGTGA
PROTEIN sequence
Length: 192
MEETAELVRAAGTGDQRSWDALVERFSGLLWAVARAHRLREADAADVVQTTWLNLVQHLGSIREPQHVGAWLATTARRECLRALNRDQRQVLTDDEAGLQVREPPPATPEEDVLAAERLALLRAALEELPPRCQQLLRVLTADPPPSYEQVSAALGMPVGSIGPTRARCLDRLRHAARLAGIVPTTGASVQ*