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PLM3_60_coex_sep16_scaffold_8080_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1565..2782)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA helicase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWS8_NOCFA similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 356.0
  • Bit_score: 420
  • Evalue 1.20e-114
RNA helicase similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 356.0
  • Bit_score: 420
  • Evalue 3.50e-115
Putative RNA helicase {ECO:0000313|EMBL:BAD57363.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 356.0
  • Bit_score: 420
  • Evalue 1.70e-114

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Taxonomy

Nocardia farcinica → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
GTGCCACCTGCCCTCACCGCCGCACTCGCCCGGCGGGGGATCACCGCCCCGCGACCCATCCAGGCCAGCGCACTACCCGACGCCCTCGCCGGCGACGACATCCTCGGTCGGGCCGAGACAGGCTCCGGCAAGACCCTGGCGTTCGGGTTGCCGCTGCTGGCCCGGCTTGCGTCGGCGCACCCCGTCGCGCGCCCGCGACAGCCGCGCGGCCTGGTGCTGGTGCCTACCCGGGAGCTGGCCGGGCAGATCCGTGACGAGCTCGGCCCGCTGGCGGCGACCCTCGGCCTGAAGCTGCTCGCCGTCTACGGTGGCGTCCCGATCCGTGCGCAGGTCCAGGCCTTGCAGCGCGGGGTCGACGTGGTCGTGGCGACCCCCGGCCGGCTCACCGACCTCTACCGCCAGGGCGCCTGCTCGCTGGACGCGGTCTGCATCACCGTGCTCGACGAAGCCGATCACATGGCCGACATGGGCTTCCTGCCTCAGGTGAGCTGGCTGCTGGACCGCGTGCCGGCCCGTGGGCAGCGACTGCTGTTCTCCGCCACGCTCGACAACGACGTCGCGACCATCGTCGGCCGGTACCTCACCGATCCGGCGCGCCACACGGTCGTCCCGTCGAGCTCGGCCGGAGCGCGGATGGACCATCAGTTCCGCACCGTCACCGCGCCGCAGAAGGTCGCCGCCGCCGCCGAGCTGGCTGCCGGCCACCGCCGTGTCCTGCTGTTCGTGCGCACCAAGCACGGCGCGGCGCGGCTCACCCGCCAGCTCGGCCAGGCCGGCGTGCGCGCCGACGCGCTCCACGGCAACCTGCCCCAGAACGCCAGGCAGCGTGCCCTGGCGGCGTTCGCCGACGGCACGGTGCCGGTGCTGGTGGCCACCGACATCGCCGCCCGCGGTATCCACGTCGACGGCGTCGACCTGGTCGTGCACTTCGATCCGCCCACCGAGCCGAAGGCGTACCTGCACCGGTCCGGGCGCACCGCGCGCGCAGGGGCAGCCGGCACCGTGGTCACCCTCGTCCTGCCGGAGCAGGCAGCGGAGGTCGCGGAGCTACGTCGGCGCGCCGGCGTGGCGACGGAGCCGGCCCCGTCGGCAGCGCGCGGCCAGCAGAACACTGCCGGACGCCAGCAGCGACGGCGCCGCCGAGTGGCCATGGGCGCCGGTGAAGCCGTCGCAGACGGCCGCAACGGACGCGTTCGCCACCTGGTGGCAGGTCCCTGA
PROTEIN sequence
Length: 406
VPPALTAALARRGITAPRPIQASALPDALAGDDILGRAETGSGKTLAFGLPLLARLASAHPVARPRQPRGLVLVPTRELAGQIRDELGPLAATLGLKLLAVYGGVPIRAQVQALQRGVDVVVATPGRLTDLYRQGACSLDAVCITVLDEADHMADMGFLPQVSWLLDRVPARGQRLLFSATLDNDVATIVGRYLTDPARHTVVPSSSAGARMDHQFRTVTAPQKVAAAAELAAGHRRVLLFVRTKHGAARLTRQLGQAGVRADALHGNLPQNARQRALAAFADGTVPVLVATDIAARGIHVDGVDLVVHFDPPTEPKAYLHRSGRTARAGAAGTVVTLVLPEQAAEVAELRRRAGVATEPAPSAARGQQNTAGRQQRRRRRVAMGAGEAVADGRNGRVRHLVAGP*