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PLM3_60_coex_sep16_scaffold_16924_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 3793..5142

Top 3 Functional Annotations

Value Algorithm Source
Nodulation efficiency protein NfeD bin=GWA2_Ignavibacteria_55_11 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 420.0
  • Bit_score: 298
  • Evalue 5.90e-78
putative protease/transporter similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 431.0
  • Bit_score: 291
  • Evalue 3.50e-76
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 444.0
  • Bit_score: 352
  • Evalue 8.30e-94

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCACGTTCGGTGGACAGCCGCGCCCTTGGCGCTCGGGGCGTTGCTGCTGGCCGGCCTGGCAGTGACCGGCGCGGGCGCCGAGGCATCCGCCGGCCACCTGACCGTCCGCGCCCTGGAGCTGCACGGCGCCGTCGACCCGTTCATCGCCGGCTACCTGGAGCGCGGCATCACCGCGGCCAACACGGCCGGGGACGCCGCCATCCTGCTCACTATCGACACCCCTGGCGGCCTCGAGTCCTCGATGCGCGTCATCGTCAAGGCGATCACCGGCTCCGGGGTGCCGGTGATCTGCTGGACCGGGCCGGCCGGGGCCAGGGCCGCCTCCGCCGGGACGTTCGTGATGCTCGCCTGCCCGTCCAACGCGATGGCCCACGGCACCAACATCGGCGCCGCCCACCCGGTCGGCGTGAGCGGCGCGATCGAGCAGGAGAAGGTGACCAACGACGCGGCCGCCTTCATCCGCTCCCTGGCCGAGCAGACCCACCGCAACGCCAGATGGGCGGAGTCCGCCGTGCGCGACTCGGCGACGCTCTCCGCCGAGCAGGCGGCCGCAGAGGACCCACCGGTAGCCGACCGGCTGGCCGACTCTACGGCGGCGCTGCTCAAGGATGTCGACGGCCTGCAGGTCGAGACCGTGGCCGGCGCGGTCACCCTCCACACCGCCGACGCCACCGTCCAGACCCAGGACCCGGGCCTCGGCGTCGCGCTGCTGCACGGGCTGATCGACCCCAACCTCGCCTTCGTCTTCTTCTACGTCGGCCTGATCCTGATCGTGATCGAGGTGCTCCACCCGGGCATCTCGGTGCCGGGCGTGCTCGGCACGCTGCTGCTGGTCACCAGCGTGGTCGCCTTCGGCATCCTGCCGGTGCAGCTGGGCGGGCTGGCCCTGCTGGCCGCCTCGGTGGTGCTGTTCCTGGTCGAGCTGAAGCATCCGGGCGTCGGCCTGCCGCTGGCCGGCGGCATCGCCTGCCTGATCCTCGGCGGCCTGCTGCTGTTCGACCCGTCGACCCCCGACGTCCATGTCTCCCGCTGGCTGCTGGCGCTGGTCACGGCCGTCATGGCCGGCTTCTTCGGCTTCGTGGTCACGGCCGTGCTCGAGGCGCGCGGCCTGCCGGCGCCCGGCGCGGGTATGGACGAACTGGTCGGGGCCGAGGGCGTCGCGCTCGGGGAGCTCGGCCCCCGCGGCGAGGTCCGGGTCGGCCATGAGCGCTGGAGCGCCGAGGCGGCCGGCGGCGCCATCCCCGCCGGGAGCGGCGTCCGCGTGGTCGGGCGGCGCGGGTTGCGACTGATCGTGGAGCCGGGGCCGACGGTGCCCCGGGAGGCTACGGGAAGGACCGTGAGGGAATGA
PROTEIN sequence
Length: 450
MHVRWTAAPLALGALLLAGLAVTGAGAEASAGHLTVRALELHGAVDPFIAGYLERGITAANTAGDAAILLTIDTPGGLESSMRVIVKAITGSGVPVICWTGPAGARAASAGTFVMLACPSNAMAHGTNIGAAHPVGVSGAIEQEKVTNDAAAFIRSLAEQTHRNARWAESAVRDSATLSAEQAAAEDPPVADRLADSTAALLKDVDGLQVETVAGAVTLHTADATVQTQDPGLGVALLHGLIDPNLAFVFFYVGLILIVIEVLHPGISVPGVLGTLLLVTSVVAFGILPVQLGGLALLAASVVLFLVELKHPGVGLPLAGGIACLILGGLLLFDPSTPDVHVSRWLLALVTAVMAGFFGFVVTAVLEARGLPAPGAGMDELVGAEGVALGELGPRGEVRVGHERWSAEAAGGAIPAGSGVRVVGRRGLRLIVEPGPTVPREATGRTVRE*