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PLM3_60_coex_sep16_scaffold_18633_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1620..2840)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Rhodococcus opacus RepID=UPI00029CAD7B similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 402.0
  • Bit_score: 568
  • Evalue 2.80e-159
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AII05414.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 403.0
  • Bit_score: 570
  • Evalue 1.30e-159
Uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 402.0
  • Bit_score: 568
  • Evalue 7.90e-160

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GTGACCTCGACTGCGCGGATCGAGGACCTGCTGCGCGAGCTGGCGCCGCAGGTCCTCGGCGCGGTGGTGCGACGCTACGGCGACTTCGACGCCGCCGAGGACGCCGTGCAGGAGGCGCTGCTGGCCGCCGCGATGCACTGGCCGGCCGAGGGGCTGCCGGACAACCCGCGCGGCTGGCTCATCCAGACCGCCGTGCGGCGGCTGACCGACCAGTACCGAAGCGACCAGGCGCGGCGGCGCCGGGAGGAGTCGGCCGCCCTGCGCGAGGTGCGCGACGCCGAGCCGGTGCCGCGGGACGACGCGCTGGTGCTGCTCTTCATGTGCTGCCATCCGGCGCTCACCCCGGCGTCCTCGATCGCGCTGACGCTGCGCGCCGTCGCCGGCCTGTCCACCGCGGAGATCGCGAAGGCATTCCTGTTGCCGGAGGCGACGATGGCGCAGCGGATCAGCCGCGCCAAGCAGAAGATCAAGGCCTCCGGCATCCCCTTCCGGATGCCCGCGCCCGAGGAGTTCGCGCCGCGGCTGGGATCCGTGCTGCACGTGCTGTACCTGCTGTTCAACGAGGGCTACACCAGCAGCGCCGGCGCCGAGCTGCACCGCACGGACCTGACCGCCGAGGCGATCCGGCTTACCAGGGCGGTGCACGCGATGCTGCCCGAGCACGGCGAGGTCACCGGGCTGCTGGCGCTGATGCTGCTGAACGACGCCCGGCGCCCGGCCCGCACCGGTGCGCACGGCGAGCTGATCCCGCTGGCCGAGCAGGACCGGGCGCGGTGGAACCGGGCGGCGATTGCGGAGGGCGTGCGGCTCACCGCCACCGCGATGTCCGGCGGCGCGGTCGGCGAGTACCAGCTGCAGGCCGCGATCGCCGCCCTGCACGACGGCGCTGAGCGCGCCGAGGACACCGACTGGCCGCAGATCCTCGACCTGTACGGTTTGCTGGAGCGGATCACCGGCAACCCGATGGTGACGCTGAACCGAGCCGTCACCGCCGCCATGGTGCACGGACCGCAAACCGGGCTGGACCTGTTGGCACCGCTGGAAGAGCGGCTGTCCGGGCATTACCGGCTCGACGCCGTGCGCGCCCATCTGCTCGACATGCGCGGCGACACCGAGGCCGCCGCCGAGCACTACCGCGCCGCCGCCGCGCGGACCACGAGCGCCCCCGAGCGGCAGTACCTAGTCACCAAGGCGGCCAGGCTCAACAAGCAGAACCGTTAG
PROTEIN sequence
Length: 407
VTSTARIEDLLRELAPQVLGAVVRRYGDFDAAEDAVQEALLAAAMHWPAEGLPDNPRGWLIQTAVRRLTDQYRSDQARRRREESAALREVRDAEPVPRDDALVLLFMCCHPALTPASSIALTLRAVAGLSTAEIAKAFLLPEATMAQRISRAKQKIKASGIPFRMPAPEEFAPRLGSVLHVLYLLFNEGYTSSAGAELHRTDLTAEAIRLTRAVHAMLPEHGEVTGLLALMLLNDARRPARTGAHGELIPLAEQDRARWNRAAIAEGVRLTATAMSGGAVGEYQLQAAIAALHDGAERAEDTDWPQILDLYGLLERITGNPMVTLNRAVTAAMVHGPQTGLDLLAPLEERLSGHYRLDAVRAHLLDMRGDTEAAAEHYRAAAARTTSAPERQYLVTKAARLNKQNR*