ggKbase home page

PLM3_60_coex_sep16_scaffold_30189_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1680..2528)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 284.0
  • Bit_score: 270
  • Evalue 2.60e-69
RluA family pseudouridine synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 275.0
  • Bit_score: 259
  • Evalue 7.10e-67
Pseudouridine synthase Tax=Oscillibacter sp. CAG:241 RepID=R6GHL9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 284.0
  • Bit_score: 270
  • Evalue 1.90e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillibacter sp. CAG:241 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 849
TGGGTGGCCGACGGGCGGGTGCTGGTCGACGGCCGGCCCCGCCCCAAGTCGCACCGGCTCCACGGCGGCGAGGGCTTGGCCTGGGAGCCGCCGCCCGAGCCGGCGGCCGGCCCGCCGGTGGGCGAGCCCCTGCCGCTCGCCGTCCGCTGGGAGGACGAGCACCTCCTGGTGGTGGCCAAACCAGCCGGGGTGGTGGTCCACCCCGCCCCCGGCCACCCGGCCGGCACCCTGGTCAACGCCCTGCTCGGCCGGGCTTCGCGGGCTGCGGGCGAGGTTGCCGGGAGCGGCCTGTCGGCGGCGGGCGGGAGCGACCGGCCGGGCATCGTCCACCGCCTCGACAAGGACACCTCCGGCCTGCTGGTGGTGGCCAAGGACGACGCGACCCACCTTGCGCTCGCCCGGGAGCTGGCCGCCCACCGGGTGGAGCGGGCCTACCTGGCGCTCGCCCAGGGCCACCTGGCCGCTGCCACCGGCACCGTCGACGCGCCGGTCGGCCGCCACCCGCGCGACCGCAAGCGCATGGCGGTGGTGGCCTCGGGCCGGCGGGCGGTCACCCACTGGCGGGTGGAGGAGCGCCTGCGGGCCGCCGACCTGGTCGAGGCCCGGCTCGAGACCGGCCGCACCCACCAGATCCGGGTCCACCTCGCCCACCTGCGTCACCCCGTCGCCGGCGACCGCACCTACGGCGCCGACCCGGCGCTGGCGGCCAGGCTCGGCCTCGGCCGCCCGTTCCTGCACGCCTGGCGGCTGGCGTTCCGACACCCGGCCACCGGGCAGCAGGTGACGGTCACCGACCCGCTCCCGGCCGAGCTCGCGGCCGTGCTCGACCGGCTCTGCCGGGGCAGCTGA
PROTEIN sequence
Length: 283
WVADGRVLVDGRPRPKSHRLHGGEGLAWEPPPEPAAGPPVGEPLPLAVRWEDEHLLVVAKPAGVVVHPAPGHPAGTLVNALLGRASRAAGEVAGSGLSAAGGSDRPGIVHRLDKDTSGLLVVAKDDATHLALARELAAHRVERAYLALAQGHLAAATGTVDAPVGRHPRDRKRMAVVASGRRAVTHWRVEERLRAADLVEARLETGRTHQIRVHLAHLRHPVAGDRTYGADPALAARLGLGRPFLHAWRLAFRHPATGQQVTVTDPLPAELAAVLDRLCRGS*