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PLM3_60_coex_sep16_scaffold_8338_1

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2..1264)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 421.0
  • Bit_score: 754
  • Evalue 5.20e-215
NAD-dependent DNA ligase (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 421.0
  • Bit_score: 676
  • Evalue 2.80e-192
DNA ligase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 421.0
  • Bit_score: 741
  • Evalue 4.20e-211

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
TTGCGCCAGAAGGACGTCTCGATCACCGCCTCCCGGCCGCTGAAATTCTTCGCCTATGCGTGGGGCGAGATGTCGGAACTGCCGGCCGATACCCAGCACGGCATGCTGGCATGGATGGACAAGGCCGGCTTTGTCGTCAATCCGCTGACGAAACTCTGCAAGGACATCGAGGACGTGCTGGCGTTCTATCGCAAGATTGGCGAAGACCGCGCCTCGCTCGGCTACGATATCGACGGCGTGGTTTACAAGATCGACCGGCTCGACTGGCAGGAACGGCTCGGCTTCGTGTCGCGCAATCCGCGCTGGGCGGTCGCGCATAAATTCGCCGCGGAGCAGGCGACCACAATCCTCAACGGCATCGACATTCAGGTCGGCCGCACCGGTGCGCTGACGCCTGTGGCGCGGCTTGCGCCGGTCACGGTGGGCGGCGTCGTGGTGCAAAACGCGACGCTGCACAATGAAGATTACATCAAAGGCATCGGCAACGACGGCAATCCGATACGCGACGGCGTCGATATCCGCATCGGCGATACCGTGGTGGTACAGCGCGCTGGCGACGTGATTCCGCAGGTGGTGAGCGTGGTGCTCGACAAGCGGCCGAAGAGCGCAAAGCCGTACTCCTTCCCGCAGGTGTGCCCAGCCTGCGGCAGCCATGCCGTGCGCGAGGAAGGCGAGGCGGTGCGCCGTTGCACCGGCGCGCTGATCTGTCCGGCGCAGGCGGTGGAACGGCTCAAGCATTTCGTGTCGCGCAATGCATTCGATATCGAAGGCCTCGGCGAGAAGCAGGTGCAGGAATTCTTCCAGGACGGGCTGATTATGTCGCCGGTCGATATTTTCACGCTGCAAAAGCGGGACGCGCGTTCCACCAGCAAGCTGATGCAGCGCGAGGGCTACGGCGAAACCTCGGTGCGCAACCTTTTTGCCGCCATCGACGCCCGCCGCAGCATCGAGCTGCACCGTCTGGTCTATGCGCTCGGCATCCGCCATGTTGGAGAGGGCAATGCCAAGCTGCTGGCGCGGCATTACGGGACGATCGATGCATTCCGCGAGGCGATGCTGGCGGCTGCCAAACACGGCACCGGCGAAGGCAACACGTCGGAAGCCTATCAGGATCTCAATGACATCGGCGGCGTCGGTGAAATCGTCGCCGATGCGGTGGTCGAGTTTTTCGCCGAGCCGCGCAACGTCAAGGCGCTCGGCGAACTCTTGCACGAAATCGAGGTGCGGCCCGCCGAGCAGCCGCGCAAGAGCTCGCCAGTTTCC
PROTEIN sequence
Length: 421
LRQKDVSITASRPLKFFAYAWGEMSELPADTQHGMLAWMDKAGFVVNPLTKLCKDIEDVLAFYRKIGEDRASLGYDIDGVVYKIDRLDWQERLGFVSRNPRWAVAHKFAAEQATTILNGIDIQVGRTGALTPVARLAPVTVGGVVVQNATLHNEDYIKGIGNDGNPIRDGVDIRIGDTVVVQRAGDVIPQVVSVVLDKRPKSAKPYSFPQVCPACGSHAVREEGEAVRRCTGALICPAQAVERLKHFVSRNAFDIEGLGEKQVQEFFQDGLIMSPVDIFTLQKRDARSTSKLMQREGYGETSVRNLFAAIDARRSIELHRLVYALGIRHVGEGNAKLLARHYGTIDAFREAMLAAAKHGTGEGNTSEAYQDLNDIGGVGEIVADAVVEFFAEPRNVKALGELLHEIEVRPAEQPRKSSPVS