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PLM3_60_coex_sep16_scaffold_11239_9

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 4809..5471

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein Tax=Bradyrhizobium elkanii RepID=UPI00038113A0 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 221.0
  • Bit_score: 392
  • Evalue 1.90e-106
Cold-shock protein {ECO:0000313|EMBL:KJC59886.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 221.0
  • Bit_score: 397
  • Evalue 8.40e-108
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 220.0
  • Bit_score: 379
  • Evalue 3.70e-103

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGGGTCGGACGGTTTTGAGTCCAAAAAGCTCGGAGGTCCACCGTCAAGCGGGGGGCCGAACAGGCTGGGGCAGAGTGAGTATTCGGTGGGCGCCGAGCGCGACCCGGCGATGGATGCGTTTTCGGGCCTCGGCGATAGTGCCGCGAATCTCGTCGAGATCAGCGGTGTCATCAAATGGTTCGATGCATCAAAGGGCTACGGCTTCATCGTGCCCGACAATGGAGCGGCGGATGTGCTTCTGCACGTCACCGTGCTTAGACGCGACGGCTATCAAACCGCTTACGAAGGCGCGCGGCTGGTCTGCGAATGCGTGCAGCGCGCGAAAGGCTATCAGGCGTTCCGGATCCTATCGATGGACGAGTCGACGGCGATTCATCCGGCGCAAATGCTGCCGGCACGGACTCATGTCAGCGTCACGCCGACCAGCGGTCTGGAGCGGGCGCAGGTCAAATGGTTCAACCGCTTACGCGGTTTCGGCTTCCTGACCTGTGGCGAGGGGACGCCGGACATCTTCGTGCACATGGAAACCTTGCGCCGCTTCGGGATGACGGAGCTGCGCCCCGGCCAGTTCGTGCTGGTACGGTTCGGGCCCGGGTCCAAGGGGATGATGGCTGCCGAGATTCAGCCGGAAACCGGGTCGCCGGGATTGTCGTCGCATTAA
PROTEIN sequence
Length: 221
MGSDGFESKKLGGPPSSGGPNRLGQSEYSVGAERDPAMDAFSGLGDSAANLVEISGVIKWFDASKGYGFIVPDNGAADVLLHVTVLRRDGYQTAYEGARLVCECVQRAKGYQAFRILSMDESTAIHPAQMLPARTHVSVTPTSGLERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRFGMTELRPGQFVLVRFGPGSKGMMAAEIQPETGSPGLSSH*