ggKbase home page

PLM3_60_coex_sep16_scaffold_12840_5

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3619..5004)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component Tax=Bradyrhizobium sp. WSM1253 RepID=I2QS04_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 461.0
  • Bit_score: 863
  • Evalue 6.20e-248
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EIG62560.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 461.0
  • Bit_score: 863
  • Evalue 8.70e-248
nrtA; ABC transporter nitrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 460.0
  • Bit_score: 860
  • Evalue 1.10e-247

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. WSM1253 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGTCCACATTCGACAACCCATTCGACCCCAACCGTCGCCTTCGCACCGGTGGCTGCAACTGCGGCCAGCATGTCAGCGAAGCCGAGCATGAGCACGCGACGCTGGCGTTGCGCTGCGAGCCGGCACAAAGCGAAGAAAAGCGCTATGAGGGCGTCGTCGCCTCCGCTGTCATGCGCGCGATGTTTCCAAAGGACGTCGCGCGCCGGGCCTTCCTGAAATCGGTCGGCGCCTCGACGGCGCTTGCCGCGATCTCTCAATTCTTCCCGCTTCAGACGGCGACCGAGGTTTTCGCGCAGGCCGGCGCACCGGAGAAGAAGGACCTTAAAGTCGGGTTCATTCCGATCACCTGCGCGACGCCGATCATCATGGCCGCGCCGCTCGGCTTCTATGCCAAGCACGGTCTTAACGTCGAGGTCGTCAAGACCGCCGGCTGGGCTGTCATTCGCGACAAGACCATCAACAAGGAATACGACGCTGCCCATATGCTGGCGCCGATGCCGATCGCGATCTCGCTGGGTCTCGGCGCAAACGCGATCCCCTTCGCTGTCCCCGCCATCGAGAACATTAACGGGCAGGGCATCACGCTCGCCATGAAGCACAAGGACAAGCGCGATCCGAAGGACTGGAAGGGCATGAAGTTCGCCATTCCGTTCGACTATTCGATCCACAATTATCTGCTGCGCTATTATCTCGCCGAACACGGCCTCGATCCCGACACCGACGTGCAATTGCGTTCGGTGCCGCCGCCGGAAATGGTCGCCAACCTCCGCGCCGACAACATCGACGGCTTCCTTGCGCCCGACAACATCTGCCAGCGCGCGATCTATGACGGCGTCGGCTTCCTGCACATCCTGTCCAAGGAAATCTGGGACGGTCACCCTTGTTGCGCCTTTGCGGCAAGCAAGGAGTTCATCACGGGATCGCCCAACAGTTTTGCGGCGCTGACGCGGGCGATCGTCGATGCCACGGCCTACGCCTCAAAGGCCGAGAATCGCAAACAGATCGCGGAGGCCATCGCGCCCGCGAATTATATCAACGCGCCCGTGACCGTGCTGGAGCAGGTTCTCACCGGCACCTATGCCGACGGACTTGGCGGCATCAAAACCGATCCCAAGCGTGTCGATTTCGATCCGTTCCCCTGGCAATCCTTCGCGGTCTGGATGCTCACCCAGATGAAGCGCTGGGGCCAGATCAAGGGCGATGTGGATTACAAGTCGGTCGCGGAGCAGGTCTATCTCGCGACCGACACCGCCAAGGTCATGAAGGAAATGGGGCTGACCCCGCCAACGACGTCGTACAAGTCGTTCGCGGTGATGGGCAAGACGTTCGATCCCGCCAAGCCCGAGGATTATCTCAACAGCTTCAAGATCAGGAAGGCGTCGTGA
PROTEIN sequence
Length: 462
MSTFDNPFDPNRRLRTGGCNCGQHVSEAEHEHATLALRCEPAQSEEKRYEGVVASAVMRAMFPKDVARRAFLKSVGASTALAAISQFFPLQTATEVFAQAGAPEKKDLKVGFIPITCATPIIMAAPLGFYAKHGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPIAISLGLGANAIPFAVPAIENINGQGITLAMKHKDKRDPKDWKGMKFAIPFDYSIHNYLLRYYLAEHGLDPDTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCAFAASKEFITGSPNSFAALTRAIVDATAYASKAENRKQIAEAIAPANYINAPVTVLEQVLTGTYADGLGGIKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKSVAEQVYLATDTAKVMKEMGLTPPTTSYKSFAVMGKTFDPAKPEDYLNSFKIRKAS*