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PLM3_60_coex_sep16_scaffold_13179_2

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3152..4126)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP51_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 311.0
  • Bit_score: 467
  • Evalue 7.00e-129
RND transporter MFP subunit {ECO:0000313|EMBL:KIZ47690.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 324.0
  • Bit_score: 469
  • Evalue 3.40e-129
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 318.0
  • Bit_score: 453
  • Evalue 2.90e-125

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
GTAGCGGGGGCGATTCAGGAAATTCATTTTCGTGAAGGTGCGCTGGTCAAACAGGGCGACCTGTTGATCCTCATCGATCCGTCCCTTTACGCGGCGGATGTCGCACGCGCCGAAGGTCAGGTGGCCGCGGCCAAAGCCCGCCTCGTCCTGACCAAGAGTGATTTCGAGCGCGGCCAGCAATTGTCGGATTCGCGCACGATTTCACAACGGGACTTCGACGGGCGCGTCAACGCCCACAGCGAAGCGGAAGCCAATCTGAAGGCGGCAGAAGCCGCCCTGCAGACCGCGCGGCTCAATCTCGGTTACACCGAAGTGCGCGCGCCGGTCGCCGGCCGGGTGGGAAAGCTTGAAATCACCGTGGGCAATCTGATCGCGGCGGGACCCGGCACGCCGGTGCTGACGACGCTTGTGTCGATCAATCCGATCTATGCCAGCTTCAATGCCGACGAGCAGGTGGTGACACGTGCGTTGAAGACGCTCGCAGACGAAGCGACGCCTTCGGAAATCGGACGCATCCCGGTGCAGATGGGCACGGGCACCTCCGAGGGCACGCCCTACAAGGGGCATATGCAGTTGATCGATAACCAGGTCGATGCACGCAGCGGCACGGTGCGGGTGCGGGCGGTGTTCGACAACGCCGACGGCCGGCTGATGCCCGGCCAGTTTGCCCGGCTGTTGATGGGACAGCCCAAAGCCGAGCCGGCGCTGTTGATCAGCGAGCGCGCTGTTGGCACCGACCAAAACAAGAAATTCGTGATGGTCGTCAACAAGGACAGCAAGGCTGAATACCGGGAGGTGGCGCTCGGAGTATCGATCGACGGAATGCGGGTGGTGACCAGCGGTCTCCACGCCGGCGAGAGGATCGTCGTCAAGGGATTACAGCGCGTTCGTCCAGGAGCGGTCGTTGCGCCCCAGGAGGTTGCAATGAATTCCGTCTCCGCGACCCAGACCGCAACCGAGGTGGTGCAGCGCTAG
PROTEIN sequence
Length: 325
VAGAIQEIHFREGALVKQGDLLILIDPSLYAADVARAEGQVAAAKARLVLTKSDFERGQQLSDSRTISQRDFDGRVNAHSEAEANLKAAEAALQTARLNLGYTEVRAPVAGRVGKLEITVGNLIAAGPGTPVLTTLVSINPIYASFNADEQVVTRALKTLADEATPSEIGRIPVQMGTGTSEGTPYKGHMQLIDNQVDARSGTVRVRAVFDNADGRLMPGQFARLLMGQPKAEPALLISERAVGTDQNKKFVMVVNKDSKAEYREVALGVSIDGMRVVTSGLHAGERIVVKGLQRVRPGAVVAPQEVAMNSVSATQTATEVVQR*