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PLM3_60_coex_sep16_scaffold_19924_4

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2025..2384)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348536F similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 222
  • Evalue 1.90e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 119.0
  • Bit_score: 223
  • Evalue 1.50e-55
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 119.0
  • Bit_score: 217
  • Evalue 1.30e-54

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCTCGCGTCAAACGCGGTGTGACCTCTCACGCCAAGCACAAGAAAGTCTACAAACTTGCCAAGGGTTTCCGCGGCCGCCGCAAGAACACCATCCGTACCGCCAAGGCCGCGGTCGAGAAGGCCGCGCAATACGCCTTCCGCGATCGCAAGCGCAAGAAGCGTACCTTCCGCGCATTGTGGATCCAGCGCCTCAATGCCGCCGTGCGTCCGCTCGGCATGACCTACAGCGTCTTTATCAACGGCCTCGCCAAGTCGGGAATCACGGTCGACCGCAAGGTGCTGTCGGATCTCGCCATCCACGAGCCGGCGGCGTTCCAGGCGATCGCTGAAAAGGCCAAGGCCGCGCTGGCGGCGTAA
PROTEIN sequence
Length: 120
MSRVKRGVTSHAKHKKVYKLAKGFRGRRKNTIRTAKAAVEKAAQYAFRDRKRKKRTFRALWIQRLNAAVRPLGMTYSVFINGLAKSGITVDRKVLSDLAIHEPAAFQAIAEKAKAALAA*