ggKbase home page

PLM3_60_coex_sep16_scaffold_29985_1

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(1..1185)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Rhizobium sp. CF080 RepID=J2TMC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 346.0
  • Bit_score: 364
  • Evalue 7.70e-98
Uncharacterized protein {ECO:0000313|EMBL:KJC48365.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 395.0
  • Bit_score: 477
  • Evalue 1.50e-131
methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 399.0
  • Bit_score: 280
  • Evalue 5.40e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGTCGATTCGCTACAAGTTTTTTTTCGCCTTTAGTGTTGTCATCGCCCTTGCCTGCGGGCTTGCGTTTTATGGCATGCGCAGCATCTCCACCTCCGGCGATCTTGTGGTGCGCCTCTACGATGGGCCGCTGATGGGAATCAATCATGCGCGTTCGGCGCATGCCGCATTGAACGCGGCGCGCCTTCTCATGCAGGCCGGCCTCCGTGAGGGGGCGCCGAAGGAAACGGTCGCGAAGATCGAAAAACTGGTCGCCGGGATCGCGGACGACCTGAAGGTCGTTCGGGATCGGGCAAGAACCAAGGATGTCACCGCGGCTTTGGAGCGGACCGAAACGGAGCTTCGCGGCTGGTCGGAAATGGGGCTGAAGATCCTCAAGCCGCAGGCCGGCGGGCTTACCACGCTTCCCATGCCTTACTCGGTAGCCAAGAAGGGGGATGCCGCCGTTGCGGCAGTGGACGATCTGGTGGAAATGGTCGCTGCCTATGGGTTCGACTACCGCACCGAAGCCGAGGCGGCGGTCGCGGCCGCCCACACCACCATGCTCGCGCTTGCGATTGCGACGACTTTGATCGGGCTGACGCTCGCGGTCGCTTTCGCACACTCCATGAGCAAACCGATCTTCGCCGCCATGCAGATCGCGGAACATGTGGCTGCCGGCAACTTCACCGACCGGATCGAGCTTCGGCGGCGCGATGAGCTTGGTCGTCTTCTGAAATCTCTCGCCGTGATGCAGGCTGGCCTGAGTGCCCGCGCGGAGGAGGATTCCGCCCTGATGTCGTCGAAGGATCAGGCGAACTCCGAGCAGGTCAATCGACGAAGGCGCATGGAGGCGGAAATCGAGACTTTCCGTTCCACCGTCACCTCCGTCCTTTCCAATGCAGATGCAATGACGAGCGAGTTGACCGAGACCGCGCGAACTCTGTCGTCAATTGCGCAGGCGGCCGGTCAACAATCGATAGAGACGGCATCGAGCGCCGATGAGACATCTGCCAACGTCCAGACCGTCTCGACCGCAGCGGGCCAGCTTGGAGAGTCAGTGCAGGCCATAGAGGGGCAACTCCACGAAGCCACCGGCATCGTGCGGCGCGCCTCAAGCATGGCTGACGAAGCAAACCAAACAATGGGAGCGCTCGCGACCGCTGCCCAGCATATTGATGAAGTGGTCGGTTTCATCCGAAACATC
PROTEIN sequence
Length: 395
MSIRYKFFFAFSVVIALACGLAFYGMRSISTSGDLVVRLYDGPLMGINHARSAHAALNAARLLMQAGLREGAPKETVAKIEKLVAGIADDLKVVRDRARTKDVTAALERTETELRGWSEMGLKILKPQAGGLTTLPMPYSVAKKGDAAVAAVDDLVEMVAAYGFDYRTEAEAAVAAAHTTMLALAIATTLIGLTLAVAFAHSMSKPIFAAMQIAEHVAAGNFTDRIELRRRDELGRLLKSLAVMQAGLSARAEEDSALMSSKDQANSEQVNRRRRMEAEIETFRSTVTSVLSNADAMTSELTETARTLSSIAQAAGQQSIETASSADETSANVQTVSTAAGQLGESVQAIEGQLHEATGIVRRASSMADEANQTMGALATAAQHIDEVVGFIRNI