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PLM3_60_coex_sep16_scaffold_4403_10

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 5433..5867

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 144.0
  • Bit_score: 177
  • Evalue 6.90e-42
Ribonuclease VapC Tax=Mycobacterium canettii RepID=G0TKA3_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 144.0
  • Bit_score: 177
  • Evalue 4.90e-42
Conserved membrane protein of unknown function with PIN domain similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 144.0
  • Bit_score: 177
  • Evalue 1.40e-42

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Taxonomy

Mycobacterium canettii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGAGCGCCACCCTGGATGCGAACCTGCTCCTCTACGCCTCCGACGAGGCGAGCCCCTTCCATGAGCGGGCCACCCAGCTGCTCGCCGAGTTGGCGGCGGGACCGGCCATCGTGTACCTGCTCTGGCCGACCGTGATGGCGTACCTACGGCTGTCGACGCATCCTTCGGTCTTCGCCCGCCCGCTCTCCCCCGAGGAGGCGAGCGGCAACATCGAGCGCCTCATGCACCAACCGCATGTGCAGAGCCCGGGAGAACAGGAGGGCTTCTGGGACGTGTACCGGGGCGTGGCCGCCGACGTCGACGCAAGGGGGAACCTCGTCCCCGATGCGCACCTGGTATCGCTGATGATCCAGAACGGCGTTCGGACCGTCTGGACGCACGACCGCGATTACCGCAAGTTCACCGGGATCGAGGTCCGTGACCCCTTCGCGTAG
PROTEIN sequence
Length: 145
VSATLDANLLLYASDEASPFHERATQLLAELAAGPAIVYLLWPTVMAYLRLSTHPSVFARPLSPEEASGNIERLMHQPHVQSPGEQEGFWDVYRGVAADVDARGNLVPDAHLVSLMIQNGVRTVWTHDRDYRKFTGIEVRDPFA*