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PLM3_60_coex_sep16_scaffold_5806_6

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: comp(3178..3771)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YQV6_NOCFA similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 194.0
  • Bit_score: 230
  • Evalue 8.70e-58
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 194.0
  • Bit_score: 230
  • Evalue 2.50e-58
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 195.0
  • Bit_score: 306
  • Evalue 2.30e-80

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCGCGTAGCCAGGCTGCGCCGCCGGAAGACCCTGTCCTGCGTGAGCGGTTCGACCGCGATGTGCTCCCTCTCCTGCCCAACCTGTACGGCGCGGCCCTCCGCCTGACCCGGAACCCGCAGGATGCGGAGGACCTCGTGCAGGAGACCTTCCTGCGCGCATACCGCGGGTTCGAAGGGTTCCGGGAGGGGACGAACCTGCGCGCGTGGATGTACCGGATCTTGACGAACACGTTCATCAACTCCTACCGGAAGAAACAGCGCGAACCGGTCACGGTCTCCGTGTCGGATGAGGACACGCCCGATTGGTACCTGTACGACCGGATCGGGTCGTCGGTGGCTCAGCCCTCGGCGGAGAGCGAGGTGCTCGAGCAGATCCCGGACGAGGATGTGCAGCGGGCCCTGGAGGATCTGCCGGAGGTCTTCCGGATGGCGGTGTTGCTCGCTGACGTCGAAGGCTTCAGCTACAAGGAGATCGCCGAGATCTTGGACATCCCGATCGGGACGGTCATGTCGAGGCTGCACCGGGGAAGGAAAGCCCTGCAACGCGCGTTGTGGGAGACGGTACGGGAGCGTGGACTTGTCACCGACTGA
PROTEIN sequence
Length: 198
MARSQAAPPEDPVLRERFDRDVLPLLPNLYGAALRLTRNPQDAEDLVQETFLRAYRGFEGFREGTNLRAWMYRILTNTFINSYRKKQREPVTVSVSDEDTPDWYLYDRIGSSVAQPSAESEVLEQIPDEDVQRALEDLPEVFRMAVLLADVEGFSYKEIAEILDIPIGTVMSRLHRGRKALQRALWETVRERGLVTD*