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PLM3_60_coex_sep16_scaffold_16747_5

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: comp(3278..3997)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 240.0
  • Bit_score: 228
  • Evalue 7.40e-57
Pseudouridine synthase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z347_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 235.0
  • Bit_score: 228
  • Evalue 5.20e-57
ribosomal large subunit pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 240.0
  • Bit_score: 228
  • Evalue 1.50e-57

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Taxonomy

Thermus thermophilus → Thermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 720
ATGGCCGTCGAGCGGCTCCAGCGCGCGCTCGCGCGGGCGGGGTTCGGTTCCCGGCGCGCGTGCGAGGAGCTGATCTCGGCGGGGCGCGTTCGGATCAACGGCCAGGGGGCCACGCTCGGCGATCGCGTGGACCCCGCGACCGACGAAGTTCGGGTCGATGGTCGCCGGATCAGCGTCGATCCCGAGCTCCGCTACTTCGTGCTCCACAAGCCGCGCGGGGTCACGACCACCATGCGCGATCCGCACGCGGAACGCGACCTGTCACTTTTGTTTCCGAAAGGCTCTCGCGTGTTCCCGGTCGGCCGCCTCGACCGCGACACCGAGGGCCTGCTGCTGCTGACGAATGACGGCTCGCTCGCGCACCGGCTGACACATCCCCGGTACGGGATCGAGAAGGAATACCTCGCCGAGGTCGACCGAGCGCCGTCGAACCGCCAGCTGTCCCGCCTGCGGCGAGGCGTGGAGCTCGACGACGGCGTCGCGCGCGCGGTCGACGCCCGCTCGGCGGGAGGTTCGGGGGGCCGCGGCGGCGTGCGGCTGGTCATGGTCGAAGGTCGCAAGCGCGAAGTGCGCAGGATGCTCGACGCGGTTGGGCTGCATGTGCGACGACTGGTCCGCGTCCGCGTCGGTCCGGTGCGTCTCGGCCAGCTGCGACCGTCCGAGCACCGCGAGCTCGACGCCACCGACGTGCGCGCGCTCTATCGGGCCGCCGGCCTGTAG
PROTEIN sequence
Length: 240
MAVERLQRALARAGFGSRRACEELISAGRVRINGQGATLGDRVDPATDEVRVDGRRISVDPELRYFVLHKPRGVTTTMRDPHAERDLSLLFPKGSRVFPVGRLDRDTEGLLLLTNDGSLAHRLTHPRYGIEKEYLAEVDRAPSNRQLSRLRRGVELDDGVARAVDARSAGGSGGRGGVRLVMVEGRKREVRRMLDAVGLHVRRLVRVRVGPVRLGQLRPSEHRELDATDVRALYRAAGL*