ggKbase home page

PLM3_60_coex_sep16_scaffold_1963_10

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(4878..5681)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein Tax=uncultured marine bacterium 583 RepID=Q6SES5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 211.0
  • Bit_score: 137
  • Evalue 1.00e-29
Flp pilus assembly protein TadD similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 234.0
  • Bit_score: 137
  • Evalue 2.90e-30
Flp pilus assembly protein TadD {ECO:0000313|EMBL:AGA28946.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 234.0
  • Bit_score: 137
  • Evalue 1.50e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 804
GTGGCCAGGCATCACGTACGCGTCGTCTGGACCCTGATTCTCCTGGTGCCGCTATGTGGGCTCATCGATCTTGCATGCCTTGCGACTCGTGGCGCCTGGGCGCAGTCGGCGGCGGACCCCATGCTCGGATGCGCGCTCCTTCAAGGACAGCCAGCCGTGCACGCCTGCGACGAAGCGATGCGTTCGCGTCTCCCCATCGAGATCCGGGCCGAAGCCTCCTACAAGAAGGGCGTCGCACTCGGCGAGCTCACGCGATACGGCGATGCGGTGAGAGCATACCGGGCCGCTATTCGCCTGAAGCCCGACTACGCCGCCGCCTACACCAATCTCGGCTTCTCACTCAGTCGGCTCGAGCGGTGGCAGGAGGCGTGCTTCGCCTACGAGAACGCGATTCGGCTGACGCCGGACGACGTCGACGCGCACTACAATCTAGGCGTGGCTCTGGTCATGCTCGGTCAACCGGGCGCGGCTCTCCGCGAGTTCCGAGAGACCGTCGAACTGGCCCCTATGGCCGCGGACGCGCACTACAACATGGGACTCGCGCTGAACAGCCTTGGGCGTCACGCGGAAGCGGTGCAGGCGTATCGCCAGGCGGTCCGGGTGCGGCCAGACTATGCCGACGCTTGGGGGAATCTCGGTCTCTCCGCGAACTTGATCGGGCAGTACCGTGAATCGGCGGACGCGTTTGAGCGGGCGAAAGCGCTGCTGCCGGCATACTTCGATAGCCGGCCGCGTCAGCGCGAAGCCTTTGAGGCCTCTCGCGGTGATGGGTCGCTCTACCGATCGGTCGTCTCGCCGAGATAG
PROTEIN sequence
Length: 268
VARHHVRVVWTLILLVPLCGLIDLACLATRGAWAQSAADPMLGCALLQGQPAVHACDEAMRSRLPIEIRAEASYKKGVALGELTRYGDAVRAYRAAIRLKPDYAAAYTNLGFSLSRLERWQEACFAYENAIRLTPDDVDAHYNLGVALVMLGQPGAALREFRETVELAPMAADAHYNMGLALNSLGRHAEAVQAYRQAVRVRPDYADAWGNLGLSANLIGQYRESADAFERAKALLPAYFDSRPRQREAFEASRGDGSLYRSVVSPR*